High Performance Conjugate Gradient 1.0.2

pts/hpcg-1.0.2 - 03 April 2017 - add -lstdc++ to LINKFLAGS

downloads.xml:

<?xml version="1.0"?>
<!--Phoronix Test Suite v7.0.1-->
<PhoronixTestSuite>
  <Downloads>
    <Package>
      <URL>https://software.sandia.gov/hpcg/downloads/hpcg-1.1.tar.gz</URL>
      <MD5>e82240700004c612bb57869984ba7079</MD5>
      <SHA256>ddef264576ed68ac9bf643ad716e133b4e371cd63a4972198aaedb3976243134</SHA256>
      <FileSize>62496</FileSize>
    </Package>
  </Downloads>
</PhoronixTestSuite>

install.sh:

#!/bin/sh

tar -zxvf hpcg-1.1.tar.gz
cd hpcg-1.1

# Find MPI To Use
if [ ! "X$MPI_PATH" = "X" ] && [ -d $MPI_PATH ] && [ -d $MPI_INCLUDE ] && [ -x $MPI_CC ] && [ -e $MPI_LIBS ]
then
	# PRE-SET MPI
	echo "Using pre-set environment variables."
elif [ -d /usr/lib/openmpi/include ]
then
	# OpenMPI On Ubuntu
	MPI_PATH=/usr/lib/openmpi
	MPI_INCLUDE=/usr/lib/openmpi/include
	MPI_LIBS=/usr/lib/openmpi/lib/libmpi.so
	MPI_CC=/usr/bin/mpicxx.openmpi
	MPI_VERSION=`$MPI_CC -showme:version 2>&1 | grep MPI | cut -d "(" -f1  | cut -d ":" -f2`
elif [ -d /usr/lib64/openmpi ]
then
	# OpenMPI On RHEL
	MPI_PATH=/usr/lib64/openmpi
	MPI_INCLUDE=/usr/include/openmpi-x86_64/
	MPI_LIBS=/usr/lib64/openmpi/lib/libmpi.so
	MPI_CC=/usr/lib64/openmpi/bin/mpicxx
	MPI_VERSION=`$MPI_CC -showme:version 2>&1 | grep MPI | cut -d "(" -f1  | cut -d ":" -f2`
elif [ -d /usr/lib/mpich/include ]
then
	# MPICH
	MPI_PATH=/usr/lib/mpich
	MPI_INCLUDE=/usr/lib/mpich/include
	MPI_LIBS=/usr/lib/libmpich.so.1.0
	MPI_CC=/usr/lib/mpich/bin/mpicxx.mpich
	MPI_VERSION=`$MPI_CC -v 2>&1 | grep "MPICH version"`
elif [ -d /usr/include/mpich2 ]
then
	# MPICH2
	MPI_PATH=/usr/include/mpich2
	MPI_INCLUDE=/usr/include/mpich2
	MPI_LIBS=/usr/lib/mpich2/lib/libmpich.so
	MPI_CC=/usr/bin/mpicxx.mpich2
	MPI_VERSION=`$MPI_CC -v 2>&1 | grep "MPICH2 version"`
elif [ -d /usr/include/mpich2-x86_64 ]
then
	# MPICH2
	MPI_PATH=/usr/include/mpich2-x86_64
	MPI_INCLUDE=/usr/include/mpich2-x86_64
	MPI_LIBS=/usr/lib64/mpich2/lib/libmpich.so
	MPI_CC=/usr/bin/mpicxx
	MPI_VERSION=`$MPI_CC -v 2>&1 | grep "MPICH2 version"`
fi

if [ ! "X$MPI_VERSION" = "X" ]
then
	VERSION_INFO=$MPI_VERSION
	if [ ! "X$LA_VERSION" = "X" ]
	then
		VERSION_INFO="$LA_VERSION + $VERSION_INFO"
	fi

	echo $VERSION_INFO > ~/install-footnote
fi

if [ "X$CFLAGS_OVERRIDE" = "X" ]
then
          CFLAGS="$CFLAGS -O3 -march=native -ffast-math -ftree-vectorize"
else
          CFLAGS="$CFLAGS_OVERRIDE"
fi

if [ "X$MPI_LD" = "X" ]
then
	MPI_LD=$MPI_CC
fi

# Make.pts generation
echo "SHELL        = /bin/sh
CD           = cd
CP           = cp
LN_S         = ln -s -f
MKDIR        = mkdir -p
RM           = /bin/rm -f
TOUCH        = touch
TOPdir       = .
SRCdir       = \$(TOPdir)/src
INCdir       = \$(TOPdir)/src
BINdir       = \$(TOPdir)/bin
MPdir        = $MPI_PATH
MPinc        = -I$MPI_INCLUDE
MPlib        = $MPI_LIBS
HPCG_INCLUDES = -I\$(INCdir) -I\$(INCdir)/\$(arch) \$(MPinc)
HPCG_LIBS     = 
HPCG_OPTS     = 
CXX          = $MPI_CC
CXXFLAGS     = \$(HPCG_DEFS) -fopenmp $CFLAGS
LINKER       = $MPI_LD
LINKFLAGS    = \$(CXXFLAGS) -lstdc++
ARCHIVER     = ar
ARFLAGS      = r
RANLIB       = echo
" > setup/Make.pts

./configure arch=pts
make
echo $? > ~/install-exit-status

cd ~
echo "#!/bin/sh
cd hpcg-1.1/bin/
rm -f *.yaml

if [ \"X\$MPI_NUM_THREADS\" = \"X\" ]
then
	MPI_NUM_THREADS=\$NUM_CPU_CORES
fi

if [ ! \"X\$HOSTFILE\" = \"X\" ] && [ -f \$HOSTFILE ]
then
	\$HOSTFILE=\"--hostfile \$HOSTFILE\"
elif [ -f /etc/hostfile ]
then
	\$HOSTFILE=\"--hostfile /etc/hostfile\"
fi

PATH=\$PATH:$MPI_PATH/bin
LD_PRELOAD=$MPI_LIBS mpirun -np \$MPI_NUM_THREADS \$HOSTFILE xhpcg
echo \$? > ~/test-exit-status

cat *.yaml > \$LOG_FILE
rm -f *.yaml" > hpcg
chmod +x hpcg

results-definition.xml:

<?xml version="1.0"?>
<!--Phoronix Test Suite v7.0.1-->
<PhoronixTestSuite>
  <ResultsParser>
    <OutputTemplate>HPCG result is VALID with a GFLOP/s rating of: #_RESULT_#</OutputTemplate>
    <LineHint>HPCG result is VALID with</LineHint>
  </ResultsParser>
</PhoronixTestSuite>

test-definition.xml:

<?xml version="1.0"?>
<!--Phoronix Test Suite v7.0.1-->
<PhoronixTestSuite>
  <TestInformation>
    <Title>High Performance Conjugate Gradient</Title>
    <AppVersion>1.1</AppVersion>
    <Description>HPCG is the High Performance Conjugate Gradient and is a new scientific benchmark from Sandia National Lans focused for super-computer testing with modern real-world workloads compared to HPCC.</Description>
    <Proportion>HIB</Proportion>
    <TimesToRun>3</TimesToRun>
    <PreInstallMessage>Supported install-time optional variables include $MPI_PATH, $MPI_INCLUDE, $MPI_CC, $MPI_LIBS, $CFLAGS, $LD_FLAGS, and $MPI_LD</PreInstallMessage>
    <PostInstallMessage>Supported run-time optional environment variables include $MPI_NUM_THREADS, $HOSTFILE</PostInstallMessage>
  </TestInformation>
  <TestProfile>
    <Version>1.0.2</Version>
    <SupportedPlatforms>Linux</SupportedPlatforms>
    <SoftwareType>Benchmark</SoftwareType>
    <TestType>Processor</TestType>
    <License>Free</License>
    <Status>Verified</Status>
    <ExternalDependencies>build-utilities, fortran-compiler, openmpi-development</ExternalDependencies>
    <EnvironmentSize>2.4</EnvironmentSize>
    <ProjectURL>http://software.sandia.gov/hpcg/default.php</ProjectURL>
    <InternalTags>SMP, MPI</InternalTags>
    <Maintainer>Michael Larabel</Maintainer>
  </TestProfile>
</PhoronixTestSuite>