fedBio

fedora21 Bio

HTML result view exported from: https://openbenchmarking.org/result/1501031-LI-FEDBIO93669.

fedBioProcessorMotherboardChipsetMemoryDiskGraphicsAudioNetworkOSKernelDesktopDisplay ServerDisplay DriverOpenGLCompilerFile-SystemScreen ResolutionSystem LayerFedBio2 x Intel Core i7-3770 @ 3.40GHz (2 Cores)Intel 440BXIntel 440BX/ZX/DX1 x 4096 MB DRAM21GB VMware Virtual SVMware SVGA IIEnsoniq ES1371 / CreativeIntel 82545EM GigabitFedora 213.17.7-300.fc21.x86_64 (x86_64)GNOME Shell 3.14.3X Server 1.16.2.901 (1.16.3 RC 1)vmware 13.0.22.1 Mesa 10.4.0 Gallium 0.4GCC 4.9.2 20141101ext41680x1050VMwareOpenBenchmarking.org- --build=x86_64-redhat-linux --disable-libgcj --disable-libunwind-exceptions --enable-__cxa_atexit --enable-bootstrap --enable-checking=release --enable-gnu-indirect-function --enable-gnu-unique-object --enable-initfini-array --enable-languages=c,c++,objc,obj-c++,fortran,ada,go,lto --enable-multilib --enable-plugin --enable-shared --enable-threads=posix --mandir=/usr/share/man --with-arch_32=i686 --with-linker-hash-style=gnu --with-tune=generic - SELinux: Enabled.

fedBiohmmer: Pfam Database Searchmafft: Multiple Sequence Alignmentmrbayes: Primate Phylogeny AnalysisFedBio23.9711.7039.22OpenBenchmarking.org

Timed HMMer Search

Pfam Database Search

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database SearchFedBio612182430SE +/- 0.05, N = 323.971. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

Multiple Sequence Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence AlignmentFedBio3691215SE +/- 0.02, N = 311.701. (CC) gcc options: -O3 -lm -lpthread

Timed MrBayes Analysis

Primate Phylogeny Analysis

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MrBayes Analysis 3.1.2Primate Phylogeny AnalysisFedBio918273645SE +/- 0.32, N = 339.22

Phoronix Test Suite v10.8.4