namd cas

AMD Ryzen AI 9 365 testing with a ASUS Zenbook S 16 UM5606WA_UM5606WA UM5606WA v1.0 (UM5606WA.308 BIOS) and AMD Radeon 512MB on Ubuntu 24.10 via the Phoronix Test Suite.

HTML result view exported from: https://openbenchmarking.org/result/2409272-NE-NAMDCAS8523&grs&sor.

namd casProcessorMotherboardChipsetMemoryDiskGraphicsAudioNetworkOSKernelDesktopDisplay ServerOpenGLCompilerFile-SystemScreen ResolutionabcAMD Ryzen AI 9 365 @ 4.31GHz (10 Cores / 20 Threads)ASUS Zenbook S 16 UM5606WA_UM5606WA UM5606WA v1.0 (UM5606WA.308 BIOS)AMD Device 15074 x 6GB LPDDR5-7500MT/s Micron MT62F1536M32D4DS-0261024GB MTFDKBA1T0QFM-1BD1AABGBAMD Radeon 512MBAMD Rembrandt Radeon HD AudioMEDIATEK Device 7925Ubuntu 24.106.11.0-rc6-phx (x86_64)GNOME Shell 47.0X Server + Wayland4.6 Mesa 24.2.3-1ubuntu1 (LLVM 19.1.0 DRM 3.58)GCC 14.2.0ext42880x1800OpenBenchmarking.orgKernel Details- a: Transparent Huge Pages: madvise- b: amdgpu.dcdebugmask=0x600 - Transparent Huge Pages: madvise- c: amdgpu.dcdebugmask=0x600 - Transparent Huge Pages: madviseProcessor Details- Scaling Governor: amd-pstate-epp powersave (Boost: Enabled EPP: balance_performance) - Platform Profile: balanced - CPU Microcode: 0xb204011 - ACPI Profile: balanced Java Details- a: OpenJDK Runtime Environment (build 21.0.5-ea+8-Ubuntu-1)Security Details- gather_data_sampling: Not affected + itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + mmio_stale_data: Not affected + reg_file_data_sampling: Not affected + retbleed: Not affected + spec_rstack_overflow: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Enhanced / Automatic IBRS; IBPB: conditional; STIBP: always-on; RSB filling; PBRSB-eIBRS: Not affected; BHI: Not affected + srbds: Not affected + tsx_async_abort: Not affected Compiler Details- b, c: --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-bootstrap --enable-cet --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2,rust --enable-libphobos-checking=release --enable-libstdcxx-backtrace --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-link-serialization=2 --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-defaulted --enable-offload-targets=nvptx-none=/build/gcc-14-zdkDXv/gcc-14-14.2.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-14-zdkDXv/gcc-14-14.2.0/debian/tmp-gcn/usr --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-build-config=bootstrap-lto-lean --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v

namd casnamd: ATPase with 327,506 Atomsgromacs: MPI CPU - water_GMX50_barenamd: STMV with 1,066,628 Atomsabc1.316281.1200.308671.355801.1070.394651.028941.1210.30440OpenBenchmarking.org

NAMD

Input: ATPase with 327,506 Atoms

OpenBenchmarking.orgns/day, More Is BetterNAMD 3.0Input: ATPase with 327,506 Atomsbac0.30510.61020.91531.22041.5255SE +/- 0.01303, N = 31.355801.316281.02894

GROMACS

Implementation: MPI CPU - Input: water_GMX50_bare

OpenBenchmarking.orgNs Per Day, More Is BetterGROMACS 2024Implementation: MPI CPU - Input: water_GMX50_barecab0.25220.50440.75661.00881.261SE +/- 0.002, N = 31.1211.1201.1071. (CXX) g++ options: -O3 -lm

NAMD

Input: STMV with 1,066,628 Atoms

OpenBenchmarking.orgns/day, More Is BetterNAMD 3.0Input: STMV with 1,066,628 Atomsbac0.08880.17760.26640.35520.444SE +/- 0.00779, N = 110.394650.308670.30440

Phoronix Test Suite v10.8.5