19072024hmmer

Intel Xeon Gold 5412U testing with a ASRockRack SPC741D8UD-2T/X550/H (11.01.HZ03 BIOS) and ASPEED on Debian 12 via the Phoronix Test Suite.

HTML result view exported from: https://openbenchmarking.org/result/2407192-NE-19072024H83.

19072024hmmerProcessorMotherboardChipsetMemoryDiskGraphicsMonitorNetworkOSKernelCompilerFile-SystemScreen ResolutionIntel Xeon Gold 5412UIntel Xeon Gold 5412U @ 3.90GHz (24 Cores / 48 Threads)ASRockRack SPC741D8UD-2T/X550/H (11.01.HZ03 BIOS)Intel Device 1bce8 x 32 GB DDR5-4400MT/s Samsung M321R4GA3BB6-CQKEG2 x 1920GB SAMSUNG MZQL21T9HCJR-00A07 + 22001GB Western Digital WUH722222ALASPEED2 x Linux SXGA2 x Intel X550Debian 126.1.0-22-amd64 (x86_64)GCC 12.2.0ext41280x1024OpenBenchmarking.org- Transparent Huge Pages: always- --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-cet --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --enable-libphobos-checking=release --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-defaulted --enable-offload-targets=nvptx-none=/build/gcc-12-bTRWOB/gcc-12-12.2.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-12-bTRWOB/gcc-12-12.2.0/debian/tmp-gcn/usr --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v - Scaling Governor: intel_pstate powersave (EPP: balance_performance) - CPU Microcode: 0x2b0005c0- gather_data_sampling: Not affected + itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + mmio_stale_data: Not affected + reg_file_data_sampling: Not affected + retbleed: Not affected + spec_rstack_overflow: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Enhanced / Automatic IBRS; IBPB: conditional; RSB filling; PBRSB-eIBRS: SW sequence; BHI: BHI_DIS_S + srbds: Not affected + tsx_async_abort: Not affected

19072024hmmerhmmer: Pfam Database SearchStandard ErrorStandard DeviationIntel Xeon Gold 5412U146.7160.270.32%OpenBenchmarking.org

Timed HMMer Search

Pfam Database Search

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 3.3.2Pfam Database SearchIntel Xeon Gold 5412U306090120150SE +/- 0.27, N = 3146.721. (CC) gcc options: -O3 -pthread -lhmmer -leasel -lm -lmpi

Phoronix Test Suite v10.8.5