namd gromacs oidn AMD Ryzen Threadripper 3990X 64-Core testing with a Gigabyte TRX40 AORUS PRO WIFI (F6 BIOS) and AMD Radeon RX 5600 OEM/5600 XT / 5700/5700 on Pop 22.04 via the Phoronix Test Suite.
HTML result view exported from: https://openbenchmarking.org/result/2402162-NE-NAMDGROMA57&grr .
namd gromacs oidn Processor Motherboard Chipset Memory Disk Graphics Audio Monitor Network OS Kernel Desktop Display Server Vulkan Compiler File-System Screen Resolution a b c d e AMD Ryzen Threadripper 3990X 64-Core @ 2.90GHz (64 Cores / 128 Threads) Gigabyte TRX40 AORUS PRO WIFI (F6 BIOS) AMD Starship/Matisse 4 x 32GB DDR4-3000MT/s CMK64GX4M2D3000C16 Samsung SSD 970 EVO Plus 500GB AMD Radeon RX 5600 OEM/5600 XT / 5700/5700 (1750/875MHz) AMD Navi 10 HDMI Audio DELL P2415Q Intel I211 + Intel Wi-Fi 6 AX200 Pop 22.04 6.6.6-76060606-generic (x86_64) GNOME Shell 42.5 X Server 1.21.1.4 1.3.267 GCC 11.4.0 ext4 3840x2160 OpenBenchmarking.org Kernel Details - Transparent Huge Pages: madvise Compiler Details - --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-bootstrap --enable-cet --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --enable-libphobos-checking=release --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-link-serialization=2 --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=/build/gcc-11-XeT9lY/gcc-11-11.4.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-XeT9lY/gcc-11-11.4.0/debian/tmp-gcn/usr --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-build-config=bootstrap-lto-lean --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v Processor Details - Scaling Governor: acpi-cpufreq schedutil (Boost: Enabled) - CPU Microcode: 0x830107a Security Details - gather_data_sampling: Not affected + itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + mmio_stale_data: Not affected + retbleed: Mitigation of untrained return thunk; SMT enabled with STIBP protection + spec_rstack_overflow: Mitigation of Safe RET + spec_store_bypass: Mitigation of SSB disabled via prctl + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Retpolines IBPB: conditional STIBP: always-on RSB filling PBRSB-eIBRS: Not affected + srbds: Not affected + tsx_async_abort: Not affected
namd gromacs oidn namd: STMV with 1,066,628 Atoms gromacs: MPI CPU - water_GMX50_bare oidn: RTLightmap.hdr.4096x4096 - CPU-Only namd: ATPase with 327,506 Atoms oidn: RT.ldr_alb_nrm.3840x2160 - CPU-Only oidn: RT.hdr_alb_nrm.3840x2160 - CPU-Only a b c d e 0.67415 3.706 0.67 2.69319 1.33 1.36 0.67097 3.710 0.66 2.69078 1.33 1.34 0.67214 3.713 0.66 2.67602 1.32 1.33 0.66967 3.712 0.66 2.64596 1.31 1.33 0.66828 3.709 0.66 2.67016 1.31 1.33 OpenBenchmarking.org
NAMD Input: STMV with 1,066,628 Atoms OpenBenchmarking.org ns/day, More Is Better NAMD 3.0b6 Input: STMV with 1,066,628 Atoms a b c d e 0.1517 0.3034 0.4551 0.6068 0.7585 SE +/- 0.00046, N = 3 SE +/- 0.00031, N = 3 SE +/- 0.00077, N = 3 SE +/- 0.00047, N = 3 SE +/- 0.00078, N = 3 0.67415 0.67097 0.67214 0.66967 0.66828
GROMACS Implementation: MPI CPU - Input: water_GMX50_bare OpenBenchmarking.org Ns Per Day, More Is Better GROMACS 2024 Implementation: MPI CPU - Input: water_GMX50_bare a b c d e 0.8354 1.6708 2.5062 3.3416 4.177 SE +/- 0.003, N = 3 SE +/- 0.001, N = 3 SE +/- 0.002, N = 3 SE +/- 0.006, N = 3 SE +/- 0.002, N = 3 3.706 3.710 3.713 3.712 3.709 1. (CXX) g++ options: -O3 -lm
Intel Open Image Denoise Run: RTLightmap.hdr.4096x4096 - Device: CPU-Only OpenBenchmarking.org Images / Sec, More Is Better Intel Open Image Denoise 2.2 Run: RTLightmap.hdr.4096x4096 - Device: CPU-Only a b c d e 0.1508 0.3016 0.4524 0.6032 0.754 SE +/- 0.00, N = 3 SE +/- 0.01, N = 3 SE +/- 0.01, N = 3 SE +/- 0.00, N = 3 SE +/- 0.00, N = 3 0.67 0.66 0.66 0.66 0.66
NAMD Input: ATPase with 327,506 Atoms OpenBenchmarking.org ns/day, More Is Better NAMD 3.0b6 Input: ATPase with 327,506 Atoms a b c d e 0.606 1.212 1.818 2.424 3.03 SE +/- 0.00287, N = 3 SE +/- 0.01095, N = 3 SE +/- 0.01722, N = 3 SE +/- 0.00176, N = 3 SE +/- 0.00122, N = 3 2.69319 2.69078 2.67602 2.64596 2.67016
Intel Open Image Denoise Run: RT.ldr_alb_nrm.3840x2160 - Device: CPU-Only OpenBenchmarking.org Images / Sec, More Is Better Intel Open Image Denoise 2.2 Run: RT.ldr_alb_nrm.3840x2160 - Device: CPU-Only a b c d e 0.2993 0.5986 0.8979 1.1972 1.4965 SE +/- 0.01, N = 3 SE +/- 0.01, N = 3 SE +/- 0.01, N = 3 SE +/- 0.00, N = 3 SE +/- 0.00, N = 3 1.33 1.33 1.32 1.31 1.31
Intel Open Image Denoise Run: RT.hdr_alb_nrm.3840x2160 - Device: CPU-Only OpenBenchmarking.org Images / Sec, More Is Better Intel Open Image Denoise 2.2 Run: RT.hdr_alb_nrm.3840x2160 - Device: CPU-Only a b c d e 0.306 0.612 0.918 1.224 1.53 SE +/- 0.00, N = 3 SE +/- 0.01, N = 3 SE +/- 0.01, N = 3 SE +/- 0.01, N = 3 SE +/- 0.01, N = 3 1.36 1.34 1.33 1.33 1.33
Phoronix Test Suite v10.8.5