hmmer1 AMD Ryzen 9 3900X 12-Core testing with a ASRock X570 Taichi (P4.00 BIOS) and Sapphire AMD Radeon RX 470/480/570/570X/580/580X/590 8GB on Arch rolling via the Phoronix Test Suite.
HTML result view exported from: https://openbenchmarking.org/result/2106136-IB-HMMER187252 .
hmmer1 Processor Motherboard Chipset Memory Disk Graphics Audio Monitor Network OS Kernel Desktop Display Server OpenGL OpenCL Vulkan Compiler File-System Screen Resolution AMD Ryzen 9 3900X 12-Core AMD Ryzen 9 3900X 12-Core @ 6.08GHz (12 Cores / 24 Threads) ASRock X570 Taichi (P4.00 BIOS) AMD Starship/Matisse 32GB 1000GB Western Digital WDS100T2B0A + 2000GB CT2000MX500SSD1 Sapphire AMD Radeon RX 470/480/570/570X/580/580X/590 8GB (1560/2100MHz) AMD Ellesmere HDMI Audio E2251 Intel I211 + Intel Wi-Fi 6 AX200 Arch rolling 5.10.43-1-lts (x86_64) KDE Plasma 5.22.0 X Server 1.20.11 4.6 Mesa 21.2.0-devel (git-c768d7d8f2) (LLVM 12.0.0) OpenCL 1.1 Mesa 21.2.0-devel (git-c768d7d8f2) 1.2.177 GCC 11.1.0 + Clang 12.0.0 + LLVM 12.0.0 ext4 1920x1080 OpenBenchmarking.org - amdgpu.ppfeaturemask=0xffffffff - Transparent Huge Pages: madvise - --disable-libssp --disable-libstdcxx-pch --disable-libunwind-exceptions --disable-werror --enable-__cxa_atexit --enable-cet=auto --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-default-ssp --enable-gnu-indirect-function --enable-gnu-unique-object --enable-install-libiberty --enable-languages=c,c++,ada,fortran,go,lto,objc,obj-c++,d --enable-lto --enable-multilib --enable-plugin --enable-shared --enable-threads=posix --mandir=/usr/share/man --with-isl --with-linker-hash-style=gnu - Scaling Governor: acpi-cpufreq powersave (Boost: Enabled) - CPU Microcode: 0x8701021 - itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional STIBP: conditional RSB filling + srbds: Not affected + tsx_async_abort: Not affected
hmmer1 hmmer: Pfam Database Search Standard Error Standard Deviation AMD Ryzen 9 3900X 12-Core 201.427 0.34 0.30% OpenBenchmarking.org
Timed HMMer Search Pfam Database Search OpenBenchmarking.org Seconds, Fewer Is Better Timed HMMer Search 3.3.2 Pfam Database Search AMD Ryzen 9 3900X 12-Core 40 80 120 160 200 SE +/- 0.34, N = 3 201.43 1. (CC) gcc options: -O3 -pthread -lhmmer -leasel -lm -lmpi
Phoronix Test Suite v10.8.4