namdcudabenchmark 2 x Intel Xeon E5-2699 v4 testing with a Supermicro X10DRG-O+-CPU v1.00 (3.1 BIOS) and ASUS NVIDIA GV102 11GB on Ubuntu 18.04 via the Phoronix Test Suite.
HTML result view exported from: https://openbenchmarking.org/result/2004072-VE-NAMDCUDAB63 .
namdcudabenchmark Processor Motherboard Chipset Memory Disk Graphics Audio Network OS Kernel Desktop Display Server Compiler File-System Screen Resolution hydrogen-namd-cuda 2 x Intel Xeon E5-2699 v4 @ 3.60GHz (44 Cores / 88 Threads) Supermicro X10DRG-O+-CPU v1.00 (3.1 BIOS) Intel Xeon E7 v4/Xeon 504GB 6 x 480GB SAMSUNG MZ7KM480 + 7682GB Micron_5210_MTFD ASUS NVIDIA GV102 11GB NVIDIA TU102 HD Audio 2 x Intel I350 Ubuntu 18.04 4.15.0-88-generic (x86_64) KDE Plasma X Server 1.19.6 GCC 7.5.0 + CUDA 10.1 ext4 1024x768 OpenBenchmarking.org - Scaling Governor: intel_pstate powersave - CPU Microcode: 0xb000038 - itlb_multihit: KVM: Mitigation of Split huge pages + l1tf: Mitigation of PTE Inversion; VMX: conditional cache flushes SMT vulnerable + mds: Mitigation of Clear buffers; SMT vulnerable + meltdown: Mitigation of PTI + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full generic retpoline IBPB: conditional IBRS_FW STIBP: conditional RSB filling + tsx_async_abort: Mitigation of Clear buffers; SMT vulnerable
namdcudabenchmark namd-cuda: ATPase Simulation - 327,506 Atoms Standard Deviation hydrogen-namd-cuda 0.07664 9.42% OpenBenchmarking.org
NAMD CUDA ATPase Simulation - 327,506 Atoms OpenBenchmarking.org days/ns, Fewer Is Better NAMD CUDA 2.13 ATPase Simulation - 327,506 Atoms hydrogen-namd-cuda 0.0172 0.0344 0.0516 0.0688 0.086 SE +/- 0.00200, N = 13 0.07664
Phoronix Test Suite v10.8.4