NAMD

AMD Ryzen Threadripper 3990X 64-Core testing with a MSI Creator TRX40 (MS-7C59) v1.0 (1.30 BIOS) and NVIDIA GeForce GT 710 1GB on CentOS Linux 7 via the Phoronix Test Suite.

HTML result view exported from: https://openbenchmarking.org/result/2003269-VE-NAMD0870425.

NAMDProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDisplay ServerCompilerFile-SystemScreen ResolutionClang 10 w/ flagsGCC 9.2.0 w/ flagsGCC 9.2.0 w/flags wo/LLVMICC w/flagsAMD Ryzen Threadripper 3990X 64-Core @ 2.90GHz (64 Cores / 128 Threads)MSI Creator TRX40 (MS-7C59) v1.0 (1.30 BIOS)AMD Starship/Matisse8 x 16384 MB DDR4-2933MT/s Kingston500GB Samsung SSD 860NVIDIA GeForce GT 710 1GBNVIDIA GK208 HDMI/DPHP V190Aquantia AQC107 NBase-T/IEEE + Intel I211 + 2 x Intel 82599ES 10-Gigabit SFI/SFP+ + Intel Device 2723CentOS Linux 75.5.10-1.el7.elrepo.x86_64 (x86_64)X ServerClang 10.0.0 + GCC 9.2.0 + LLVM 10.0.0xfs1366x768GCC 9.2.0 + Clang 10.0.0 + LLVM 10.0.0GCC 9.2.0ICC + GCC 9.2.0 + Intel oneAPI DPC++ Compiler 2021.1-beta03 (2019.10.0.1121)OpenBenchmarking.orgProcessor Details- Scaling Governor: acpi-cpufreq performance - CPU Microcode: 0x8301025Security Details- SELinux + itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional STIBP: conditional RSB filling + tsx_async_abort: Not affected

NAMDnamd: ATPase Simulation - 327,506 AtomsDifferenceStandard DeviationClang 10 w/ flagsGCC 9.2.0 w/ flagsGCC 9.2.0 w/flags wo/LLVMICC w/flags0.376551.00x0.76%0.375821.00x0.88%0.374921.01x0.57%0.377211.00x0.85%OpenBenchmarking.org

NAMD

ATPase Simulation - 327,506 Atoms

OpenBenchmarking.orgdays/ns, Fewer Is BetterNAMD 2.13ATPase Simulation - 327,506 AtomsClang 10 w/ flagsGCC 9.2.0 w/ flagsGCC 9.2.0 w/flags wo/LLVMICC w/flags0.08490.16980.25470.33960.4245SE +/- 0.00116, N = 6SE +/- 0.00135, N = 6SE +/- 0.00087, N = 6SE +/- 0.00131, N = 60.376550.375820.374920.37721

Phoronix Test Suite v10.8.4