fd-confb-ws.computational-biology

Intel Xeon E5620 testing on RedHatEnterpriseClient 5.3 via the Phoronix Test Suite.

HTML result view exported from: https://openbenchmarking.org/result/1211069-SU-FDCONFBWS14&grs.

fd-confb-ws.computational-biologyProcessorChipsetMemoryDiskGraphicsAudioNetworkOSKernelDisplay DriverCompilerFile-Systemfd-confb-ws_cbIntel Xeon E5620 @ 2.40GHz (4 Cores)Intel X58 I/O + ICH106 x 2048 MB 1066MHz500GB Seagate ST3500418ASNVIDIA 05ffIntel 82801JIBroadcom NetXtreme BCM5755 Gigabit PCIRedHatEnterpriseClient 5.32.6.18-128.el5 (x86_64)NVIDIA 1.0.0GCC 4.1.2 20080704ext3OpenBenchmarking.org- --disable-dssi --disable-libunwind-exceptions --disable-plugin --enable-__cxa_atexit --enable-checking=release --enable-java-awt=gtk --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-libgcj-multifile --enable-shared --enable-threads=posix --host=x86_64-redhat-linux --mandir=/usr/share/man --with-cpu=generic --with-java-home=/usr/lib/jvm/java-1.4.2-gcj-1.4.2.0/jre - Scaling Governor: ondemand

fd-confb-ws.computational-biologymafft: Multiple Sequence Alignmenthmmer: Pfam Database Searchfd-confb-ws_cb11.5232.09OpenBenchmarking.org

Timed MAFFT Alignment

Multiple Sequence Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmentfd-confb-ws_cb3691215SE +/- 0.03, N = 311.521. (CC) gcc options: -O3 -lm -lpthread

Timed HMMer Search

Pfam Database Search

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchfd-confb-ws_cb714212835SE +/- 0.03, N = 332.091. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Phoronix Test Suite v10.8.4