pts/computational-biology

4 x AMD Opteron 6282 SE testing with a Supermicro H8QG6 and NVIDIA Quadro 4000/PCIe/SSE2 2048MB on CentOS 6.2 via the Phoronix Test Suite.

HTML result view exported from: https://openbenchmarking.org/result/1203155-SOON-PTSCOMP00.

pts/computational-biologyProcessorMotherboardChipsetMemoryDiskGraphicsAudioNetworkOSKernelDesktopDisplay ServerDisplay DriverCompilerFile-SystemScreen Resolution2012-03-15 19:384 x AMD Opteron 6282 SE @ 2.60GHz (64 Cores)Supermicro H8QG6ATI RD890 + SB7x0/SB8x0/SB9x08 x 8192 MB DDR3-1333MHz999GB Logical VolumeNVIDIA Quadro 4000/PCIe/SSE2 2048MBNVIDIA GF100 HD AudioIntel 82576 Gigabit ConnectionCentOS 6.22.6.32-220.7.1.el6.x86_64 (x86_64)GNOME 2.28.2X Server 1.10.4NVIDIA 295.20GCC 4.4.6ext41920x1080OpenBenchmarking.org- Firefox was running on this system.

pts/computational-biologyhmmer: Pfam Database Searchmafft: Multiple Sequence Alignment2012-03-15 19:3813.9011.87OpenBenchmarking.org

Timed HMMer Search

Pfam Database Search

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Search2012-03-15 19:3848121620SE +/- 0.09, N = 313.90

Timed MAFFT Alignment

Multiple Sequence Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignment2012-03-15 19:383691215SE +/- 0.18, N = 411.87

Phoronix Test Suite v10.8.4