hmmer_danag_test

Intel Xeon E5-2620 v2 testing with a X79 (INTEL Xeon E5/Corei7 DMI2 C600/C200 Cipset (4.6.5 BIOS) and ASUS NVIDIA NVD9 1GB on Debian 12 via the Phoronix Test Suite.

HTML result view exported from: https://openbenchmarking.org/result/2403196-NE-HMMERDANA03.

hmmer_danag_testProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay ServerDisplay DriverOpenGLCompilerFile-SystemScreen Resolutionhmmer_run_danagIntel Xeon E5-2620 v2 @ 2.60GHz (6 Cores / 12 Threads)X79 (INTEL Xeon E5/Corei7 DMI2 C600/C200 Cipset (4.6.5 BIOS)Intel Xeon E7 v2/Xeon2 x 32 GB DDR3-1600MT/s HMT84GL7AMR4C128GB NE-128 + 1000GB Seagate ST1000LM010-9YH1 + 120GB KINGSTON SV300S3 + 1000GB Western Digital WD10JPVT-22AASUS NVIDIA NVD9 1GBRealtek ALC662 rev3PHL26PFL3405Realtek RTL8111/8168/8411Debian 126.1.0-18-amd64 (x86_64)GNOME Shell 43.9X Server 1.21.1.7nouveau4.3 Mesa 22.3.6GCC 12.2.0ext41280x768OpenBenchmarking.org- Transparent Huge Pages: always- --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-cet --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --enable-libphobos-checking=release --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-defaulted --enable-offload-targets=nvptx-none=/build/gcc-12-bTRWOB/gcc-12-12.2.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-12-bTRWOB/gcc-12-12.2.0/debian/tmp-gcn/usr --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v - Scaling Governor: intel_cpufreq schedutil - CPU Microcode: 0x42e- gather_data_sampling: Not affected + itlb_multihit: KVM: Mitigation of VMX disabled + l1tf: Mitigation of PTE Inversion; VMX: conditional cache flushes SMT vulnerable + mds: Mitigation of Clear buffers; SMT vulnerable + meltdown: Mitigation of PTI + mmio_stale_data: Unknown: No mitigations + retbleed: Not affected + spec_rstack_overflow: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Retpolines IBPB: conditional IBRS_FW STIBP: conditional RSB filling PBRSB-eIBRS: Not affected + srbds: Not affected + tsx_async_abort: Not affected

hmmer_danag_testhmmer: Pfam Database SearchStandard ErrorStandard Deviationhmmer_run_danag269.2770.620.40%OpenBenchmarking.org

Timed HMMer Search

Pfam Database Search

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 3.3.2Pfam Database Searchhmmer_run_danag60120180240300SE +/- 0.62, N = 3269.281. (CC) gcc options: -O3 -pthread -lhmmer -leasel -lm -lmpi

Phoronix Test Suite v10.8.4