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Intel Xeon E5520 testing with a HP ProLiant DL180 G6 (O20 BIOS) and mgadrmfb on CentOS Linux 7 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2205125-NE-1204293BY35
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Bioinformatics 3 Tests
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April 29 2012
 
storagehp_test
May 12 2022
  1 Hour, 6 Minutes
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test

Processor: AMD Phenom II X4 945 @ 3.00GHz (4 Cores), Motherboard: Gigabyte GA-MA78GM-S2H, Memory: 6144MB, Disk: 160GB Seagate ST3160215AS, Graphics: Gallium 0.4 on AMD RS780 512MB, Audio: Realtek ALC889A, Monitor: PLE2607WS

OS: Calculate Linux Desktop 11.15 GNOME, Kernel: 3.3.3-calculate (x86_64), Desktop: GNOME Shell 3.2.2.1, Display Server: X Server 1.11.2, OpenGL: 2.1 Mesa 7.11.2 Gallium 0.4, Compiler: GCC 4.5.3 + LLVM 2.9, File-System: ext4, Screen Resolution: 1920x1200

storagehp_test

Processor: Intel Xeon E5520 @ 2.27GHz (4 Cores / 8 Threads), Motherboard: HP ProLiant DL180 G6 (O20 BIOS), Memory: 2048 MB + 4096 MB + 2048 MB + 2048 MB DDR3-1333MT/s, Disk: 250GB LOGICAL VOLUME + 6 x 500GB LOGICAL VOLUME, Graphics: mgadrmfb, Monitor: ASUS VS197

OS: CentOS Linux 7, Kernel: 3.10.0-1160.el7.x86_64 (x86_64), Compiler: GCC 4.8.5 20150623, File-System: xfs, Screen Resolution: 1024x768

Kernel Notes: Transparent Huge Pages: always
Compiler Notes: --build=x86_64-redhat-linux --disable-libgcj --disable-libunwind-exceptions --enable-__cxa_atexit --enable-bootstrap --enable-checking=release --enable-gnu-indirect-function --enable-gnu-unique-object --enable-initfini-array --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-shared --enable-threads=posix --mandir=/usr/share/man --with-arch_32=x86-64 --with-linker-hash-style=gnu --with-tune=generic
Processor Notes: Scaling Governor: acpi-cpufreq conservative (Boost: Enabled) - CPU Microcode: 0x1d
Security Notes: SELinux + itlb_multihit: KVM: Mitigation of Split huge pages + l1tf: Mitigation of PTE Inversion; VMX: conditional cache flushes SMT vulnerable + mds: Vulnerable: Clear buffers attempted no microcode; SMT vulnerable + meltdown: Mitigation of PTI + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of Load fences usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full retpoline IBPB + srbds: Not affected + tsx_async_abort: Not affected

phoronixProcessorMotherboardMemoryDiskGraphicsAudioMonitorOSKernelDesktopDisplay ServerOpenGLCompilerFile-SystemScreen Resolutionteststoragehp_testAMD Phenom II X4 945 @ 3.00GHz (4 Cores)Gigabyte GA-MA78GM-S2H6144MB160GB Seagate ST3160215ASGallium 0.4 on AMD RS780 512MBRealtek ALC889APLE2607WSCalculate Linux Desktop 11.15 GNOME3.3.3-calculate (x86_64)GNOME Shell 3.2.2.1X Server 1.11.22.1 Mesa 7.11.2 Gallium 0.4GCC 4.5.3 + LLVM 2.9ext41920x1200Intel Xeon E5520 @ 2.27GHz (4 Cores / 8 Threads)HP ProLiant DL180 G6 (O20 BIOS)2048 MB + 4096 MB + 2048 MB + 2048 MB DDR3-1333MT/s250GB LOGICAL VOLUME + 6 x 500GB LOGICAL VOLUMEmgadrmfbASUS VS197CentOS Linux 73.10.0-1160.el7.x86_64 (x86_64)GCC 4.8.5 20150623xfs1024x768OpenBenchmarking.orgKernel Details- storagehp_test: Transparent Huge Pages: alwaysCompiler Details- storagehp_test: --build=x86_64-redhat-linux --disable-libgcj --disable-libunwind-exceptions --enable-__cxa_atexit --enable-bootstrap --enable-checking=release --enable-gnu-indirect-function --enable-gnu-unique-object --enable-initfini-array --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-shared --enable-threads=posix --mandir=/usr/share/man --with-arch_32=x86-64 --with-linker-hash-style=gnu --with-tune=generic Processor Details- storagehp_test: Scaling Governor: acpi-cpufreq conservative (Boost: Enabled) - CPU Microcode: 0x1dSecurity Details- storagehp_test: SELinux + itlb_multihit: KVM: Mitigation of Split huge pages + l1tf: Mitigation of PTE Inversion; VMX: conditional cache flushes SMT vulnerable + mds: Vulnerable: Clear buffers attempted no microcode; SMT vulnerable + meltdown: Mitigation of PTI + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of Load fences usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full retpoline IBPB + srbds: Not affected + tsx_async_abort: Not affected

test vs. storagehp_test ComparisonPhoronix Test SuiteBaseline+32.4%+32.4%+64.8%+64.8%+97.2%+97.2%129.6%105.1%93.7%64.9%63.4%34.3%33.8%32.3%28.2%20.7%18.6%15.2%Total TimeP.P.SSolitaireLU.AEP.BUA.AIS.CP.D.SM.S.AC.S.TG.I.R.1.STime To CompileQuasigroup7.8%Elapsed Time5.4%C-RayHimeno BenchmarkMinionNAS Parallel BenchmarksNAS Parallel BenchmarksNAS Parallel BenchmarksNAS Parallel BenchmarksTimed HMMer SearchTimed MAFFT Alignment7-Zip CompressionSmallptTimed PHP CompilationMinionCraftyteststoragehp_test

phoronixcompress-7zip: Compress Speed Testcompress-pbzip2: 256MB File Compressionx264: H.264 Video Encodingopenssl: RSA 4096-bit Performancegcrypt: CAMELLIA256-ECB Cipherjohn-the-ripper: Blowfishgraphics-magick: Local Adaptive Thresholdinggraphics-magick: Resizinghimeno: Poisson Pressure Solverc-ray: Total Timesmallpt: Global Illumination Renderer; 100 Samplescrafty: Elapsed Timehmmer: Pfam Database Searchmafft: Multiple Sequence Alignmentminion: Quasigroupminion: Solitairenpb: EP.Bnpb: IS.Cnpb: LU.Anpb: UA.Abuild-php: Time To Compileteststoragehp_test862317.1463.2656.65320033994399508.7993.79204113.5925.1113.07233.02389.5887.6468.994446.4418.3854.521040833481043.58210840.855172119.7018.97310.194251.109582201.137362143.2192.337333.4924.6947.341OpenBenchmarking.org

7-Zip Compression

OpenBenchmarking.orgMIPS, More Is Better7-Zip Compression 9.20.1Compress Speed Testteststoragehp_test2K4K6K8K10KSE +/- 14.98, N = 3SE +/- 564.72, N = 128623104081. (CXX) g++ options: -pipe -lpthread
OpenBenchmarking.orgMIPS, More Is Better7-Zip Compression 9.20.1Compress Speed Testteststoragehp_test2K4K6K8K10KMin: 8594 / Avg: 8623 / Max: 8644Min: 6625 / Avg: 10407.92 / Max: 123271. (CXX) g++ options: -pipe -lpthread

Parallel BZIP2 Compression

OpenBenchmarking.orgSeconds, Fewer Is BetterParallel BZIP2 Compression 1.0.5256MB File Compressiontest48121620SE +/- 0.02, N = 317.141. (CXX) g++ options: -O2 -pthread -lpthread -lbz2

x264

OpenBenchmarking.orgFrames Per Second, More Is Betterx264 2011-12-06H.264 Video Encodingtest1428425670SE +/- 0.11, N = 363.26

OpenSSL

OpenBenchmarking.orgSigns Per Second, More Is BetterOpenSSL 1.0.0eRSA 4096-bit Performancetest1326395265SE +/- 0.05, N = 456.651. (CC) gcc options: -m64 -O3 -lssl -lcrypto -ldl

Gcrypt Library

OpenBenchmarking.orgMicroseconds, Fewer Is BetterGcrypt Library 1.4.4CAMELLIA256-ECB Ciphertest7001400210028003500SE +/- 5.77, N = 332001. (CC) gcc options: -O2 -fvisibility=hidden
OpenBenchmarking.orgMicroseconds, Fewer Is BetterGcrypt Library 1.4.4CAMELLIA256-ECB Ciphertest6001200180024003000Min: 3190 / Avg: 3200 / Max: 32101. (CC) gcc options: -O2 -fvisibility=hidden

CAMELLIA256-ECB Cipher

storagehp_test: The test quit with a non-zero exit status. The test quit with a non-zero exit status. The test quit with a non-zero exit status. E: gcrypt: line 2: ./libgcrypt-1.4.4/tests/benchmark: No such file or directory

John The Ripper

OpenBenchmarking.orgReal C/S, More Is BetterJohn The Ripper 1.7.9Test: Blowfishteststoragehp_test7001400210028003500SE +/- 2.08, N = 3SE +/- 2.33, N = 3339933481. (CC) gcc options: -fopenmp -lcrypt
OpenBenchmarking.orgReal C/S, More Is BetterJohn The Ripper 1.7.9Test: Blowfishteststoragehp_test6001200180024003000Min: 3396 / Avg: 3399 / Max: 3403Min: 3343 / Avg: 3347.67 / Max: 33501. (CC) gcc options: -fopenmp -lcrypt

GraphicsMagick

OpenBenchmarking.orgIterations Per Minute, More Is BetterGraphicsMagick 1.3.12Operation: Local Adaptive Thresholdingtest1020304050SE +/- 0.00, N = 3431. (CC) gcc options: -std=gnu99 -fopenmp -O2 -pthread -llcms -ltiff -lfreetype -ljasper -ljpeg -lwmflite -lXext -lSM -lICE -lX11 -lbz2 -lxml2 -lz -lm -lrt -lpthread

OpenBenchmarking.orgIterations Per Minute, More Is BetterGraphicsMagick 1.3.12Operation: Resizingtest20406080100SE +/- 0.33, N = 3991. (CC) gcc options: -std=gnu99 -fopenmp -O2 -pthread -llcms -ltiff -lfreetype -ljasper -ljpeg -lwmflite -lXext -lSM -lICE -lX11 -lbz2 -lxml2 -lz -lm -lrt -lpthread

Himeno Benchmark

The Himeno benchmark is a linear solver of pressure Poisson using a point-Jacobi method. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgMFLOPS, More Is BetterHimeno Benchmark 3.0Poisson Pressure Solverteststoragehp_test2004006008001000SE +/- 1.26, N = 3SE +/- 0.71, N = 3508.791043.581. (CC) gcc options: -O3
OpenBenchmarking.orgMFLOPS, More Is BetterHimeno Benchmark 3.0Poisson Pressure Solverteststoragehp_test2004006008001000Min: 506.41 / Avg: 508.79 / Max: 510.71Min: 1042.66 / Avg: 1043.58 / Max: 1044.991. (CC) gcc options: -O3

C-Ray

This is a test of C-Ray, a simple raytracer designed to test the floating-point CPU performance. This test is multi-threaded (16 threads per core), will shoot 8 rays per pixel for anti-aliasing, and will generate a 1600 x 1200 image. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterC-Ray 1.1Total Timeteststoragehp_test20406080100SE +/- 0.01, N = 3SE +/- 0.01, N = 393.7940.861. (CC) gcc options: -lm -lpthread -O3
OpenBenchmarking.orgSeconds, Fewer Is BetterC-Ray 1.1Total Timeteststoragehp_test20406080100Min: 93.77 / Avg: 93.79 / Max: 93.81Min: 40.84 / Avg: 40.86 / Max: 40.881. (CC) gcc options: -lm -lpthread -O3

Smallpt

Smallpt is a C++ global illumination renderer written in less than 100 lines of code. Global illumination is done via unbiased Monte Carlo path tracing and there is multi-threading support via the OpenMP library. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterSmallpt 1.0Global Illumination Renderer; 100 Samplesteststoragehp_test4080120160200SE +/- 0.00, N = 32041721. (CXX) g++ options: -fopenmp
OpenBenchmarking.orgSeconds, Fewer Is BetterSmallpt 1.0Global Illumination Renderer; 100 Samplesteststoragehp_test4080120160200Min: 204 / Avg: 204 / Max: 2041. (CXX) g++ options: -fopenmp

Crafty

OpenBenchmarking.orgSeconds, Fewer Is BetterCrafty 23.4Elapsed Timeteststoragehp_test306090120150SE +/- 0.23, N = 3SE +/- 0.13, N = 3113.59119.701. (CC) gcc options: -lstdc++ -lm
OpenBenchmarking.orgSeconds, Fewer Is BetterCrafty 23.4Elapsed Timeteststoragehp_test20406080100Min: 113.3 / Avg: 113.59 / Max: 114.05Min: 119.44 / Avg: 119.7 / Max: 119.841. (CC) gcc options: -lstdc++ -lm

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchteststoragehp_test612182430SE +/- 0.15, N = 3SE +/- 0.01, N = 325.1118.971. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchteststoragehp_test612182430Min: 24.81 / Avg: 25.11 / Max: 25.27Min: 18.95 / Avg: 18.97 / Max: 18.991. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmentteststoragehp_test3691215SE +/- 0.00, N = 3SE +/- 0.15, N = 1513.0710.191. (CC) gcc options: -O3 -lm -lpthread
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmentteststoragehp_test48121620Min: 13.07 / Avg: 13.07 / Max: 13.07Min: 9.55 / Avg: 10.19 / Max: 11.391. (CC) gcc options: -O3 -lm -lpthread

Minion

OpenBenchmarking.orgSeconds, Fewer Is BetterMinion 0.12Benchmark: Quasigroupteststoragehp_test50100150200250SE +/- 1.68, N = 3SE +/- 0.62, N = 3233.02251.111. (CXX) g++ options: -O3 -fomit-frame-pointer -rdynamic -lboost_iostreams-mt -lz -lbz2
OpenBenchmarking.orgSeconds, Fewer Is BetterMinion 0.12Benchmark: Quasigroupteststoragehp_test50100150200250Min: 230.8 / Avg: 233.02 / Max: 236.32Min: 249.89 / Avg: 251.11 / Max: 251.971. (CXX) g++ options: -O3 -fomit-frame-pointer -rdynamic -lboost_iostreams-mt -lz -lbz2

OpenBenchmarking.orgSeconds, Fewer Is BetterMinion 0.12Benchmark: Solitaireteststoragehp_test80160240320400SE +/- 56.11, N = 6SE +/- 0.21, N = 3389.58201.141. (CXX) g++ options: -O3 -fomit-frame-pointer -rdynamic -lboost_iostreams-mt -lz -lbz2
OpenBenchmarking.orgSeconds, Fewer Is BetterMinion 0.12Benchmark: Solitaireteststoragehp_test70140210280350Min: 262.16 / Avg: 389.58 / Max: 516.91Min: 200.72 / Avg: 201.14 / Max: 201.411. (CXX) g++ options: -O3 -fomit-frame-pointer -rdynamic -lboost_iostreams-mt -lz -lbz2

NAS Parallel Benchmarks

OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: EP.Bteststoragehp_test306090120150SE +/- 0.38, N = 3SE +/- 1.29, N = 387.64143.211. (F9X) gfortran options: -fopenmp
OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: EP.Bteststoragehp_test306090120150Min: 87.01 / Avg: 87.64 / Max: 88.33Min: 140.64 / Avg: 143.21 / Max: 144.511. (F9X) gfortran options: -fopenmp

OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: IS.Cteststoragehp_test20406080100SE +/- 0.98, N = 6SE +/- 0.06, N = 368.9992.331. (F9X) gfortran options: -fopenmp
OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: IS.Cteststoragehp_test20406080100Min: 67.4 / Avg: 68.99 / Max: 72.1Min: 92.24 / Avg: 92.33 / Max: 92.441. (F9X) gfortran options: -fopenmp

OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: LU.Ateststoragehp_test16003200480064008000SE +/- 16.48, N = 3SE +/- 43.95, N = 34446.447333.491. (F9X) gfortran options: -fopenmp
OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: LU.Ateststoragehp_test13002600390052006500Min: 4428.86 / Avg: 4446.44 / Max: 4479.38Min: 7278.65 / Avg: 7333.49 / Max: 7420.41. (F9X) gfortran options: -fopenmp

OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: UA.Ateststoragehp_test612182430SE +/- 0.12, N = 3SE +/- 0.19, N = 318.3824.691. (F9X) gfortran options: -fopenmp
OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: UA.Ateststoragehp_test612182430Min: 18.25 / Avg: 18.38 / Max: 18.61Min: 24.32 / Avg: 24.69 / Max: 24.881. (F9X) gfortran options: -fopenmp

Timed PHP Compilation

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed PHP Compilation 5.2.9Time To Compileteststoragehp_test1224364860SE +/- 0.45, N = 3SE +/- 0.08, N = 354.5247.341. (CC) gcc options: -O2 -pedantic -ldl -lz -lm
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed PHP Compilation 5.2.9Time To Compileteststoragehp_test1122334455Min: 53.7 / Avg: 54.52 / Max: 55.24Min: 47.2 / Avg: 47.34 / Max: 47.471. (CC) gcc options: -O2 -pedantic -ldl -lz -lm

test

Processor: AMD Phenom II X4 945 @ 3.00GHz (4 Cores), Motherboard: Gigabyte GA-MA78GM-S2H, Memory: 6144MB, Disk: 160GB Seagate ST3160215AS, Graphics: Gallium 0.4 on AMD RS780 512MB, Audio: Realtek ALC889A, Monitor: PLE2607WS

OS: Calculate Linux Desktop 11.15 GNOME, Kernel: 3.3.3-calculate (x86_64), Desktop: GNOME Shell 3.2.2.1, Display Server: X Server 1.11.2, OpenGL: 2.1 Mesa 7.11.2 Gallium 0.4, Compiler: GCC 4.5.3 + LLVM 2.9, File-System: ext4, Screen Resolution: 1920x1200

Testing initiated at 29 April 2012 14:57 by user olivier.

storagehp_test

Processor: Intel Xeon E5520 @ 2.27GHz (4 Cores / 8 Threads), Motherboard: HP ProLiant DL180 G6 (O20 BIOS), Memory: 2048 MB + 4096 MB + 2048 MB + 2048 MB DDR3-1333MT/s, Disk: 250GB LOGICAL VOLUME + 6 x 500GB LOGICAL VOLUME, Graphics: mgadrmfb, Monitor: ASUS VS197

OS: CentOS Linux 7, Kernel: 3.10.0-1160.el7.x86_64 (x86_64), Compiler: GCC 4.8.5 20150623, File-System: xfs, Screen Resolution: 1024x768

Kernel Notes: Transparent Huge Pages: always
Compiler Notes: --build=x86_64-redhat-linux --disable-libgcj --disable-libunwind-exceptions --enable-__cxa_atexit --enable-bootstrap --enable-checking=release --enable-gnu-indirect-function --enable-gnu-unique-object --enable-initfini-array --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-shared --enable-threads=posix --mandir=/usr/share/man --with-arch_32=x86-64 --with-linker-hash-style=gnu --with-tune=generic
Processor Notes: Scaling Governor: acpi-cpufreq conservative (Boost: Enabled) - CPU Microcode: 0x1d
Security Notes: SELinux + itlb_multihit: KVM: Mitigation of Split huge pages + l1tf: Mitigation of PTE Inversion; VMX: conditional cache flushes SMT vulnerable + mds: Vulnerable: Clear buffers attempted no microcode; SMT vulnerable + meltdown: Mitigation of PTI + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of Load fences usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full retpoline IBPB + srbds: Not affected + tsx_async_abort: Not affected

Testing initiated at 12 May 2022 10:18 by user .