compbio-feb7

2 x AMD Opteron 6348 testing with a ASUS KGP(M)E-D16 and ASPEED ASPEED Family 1024MB on Ubuntu 16.04 via the Phoronix Test Suite.

HTML result view exported from: https://openbenchmarking.org/result/1702070-KH-COMPBIOFE04.

compbio-feb7ProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay DriverCompilerFile-SystemScreen Resolutionolfaction2 x AMD Opteron 6348 @ 2.80GHz (24 Cores)ASUS KGP(M)E-D16AMD RD890 + SB7x0/SB8x0/SB9x064512MB4 x 8002GB Seagate ST8000AS0002-1NA + 2000GB Western Digital WD2002FAEX-0ASPEED ASPEED Family 1024MBAMD Caicos HDMI AudioLEN L192pIntel 82574L Gigabit ConnectionUbuntu 16.044.4.0-62-generic (x86_64)Unity 7.4.0modesetting 1.18.4GCC 5.4.0 20160609ext41280x1024OpenBenchmarking.org- --build=x86_64-linux-gnu --disable-browser-plugin --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --enable-libmpx --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-arch-directory=amd64 --with-default-libstdcxx-abi=new --with-multilib-list=m32,m64,mx32 --with-tune=generic -v - Scaling Governor: acpi-cpufreq ondemand

compbio-feb7hmmer: Pfam Database Searchmafft: Multiple Sequence Alignmentolfaction12.325.56OpenBenchmarking.org

Timed HMMer Search

Pfam Database Search

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searcholfaction3691215SE +/- 0.21, N = 412.321. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

Multiple Sequence Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmentolfaction1.2512.5023.7535.0046.255SE +/- 0.12, N = 65.561. (CC) gcc options: -O3 -lm -lpthread

Phoronix Test Suite v10.8.4