paulc-48cores-native

Running pts/mafft-1.4.0 via the Phoronix Test Suite.

HTML result view exported from: https://openbenchmarking.org/result/1611121-KH-1207025BY46.

paulc-48cores-nativeProcessorMotherboardChipsetMemoryDiskGraphicsNetworkAudioOSKernelDesktopDisplay ServerDisplay DriverCompilerFile-SystemScreen ResolutionOpenGL2012-07-02 14:29AMD Opteron 61684 x Intel Xeon E7- 4850 @ 2.00GHz (48 Cores)Dell 0JRJM9Intel 5520/5500/X58 + ICH10516096MB898GB PERC H700 + 19998GB PERC H800Matrox MGA G200eW WPCM450Broadcom NetXtreme II BCM5709 GigabitUbuntu 12.043.2.0-26-generic (x86_64)Unity 2D 5.12.0X Server 1.11.3vesa 2.3.0GCC 4.6ext41024x7684 x AMD Opteron 6168 @ 0.80GHz (48 Cores)Supermicro H8QG6AMD RD890 + SB7x0/SB8x0/SB9x032768MB32GB SanDisk SSD U100 + 250GB Samsung SSD 850NVIDIA GeForce GTX 970 4096MB (135/324MHz)NVIDIA GM204 HD AudioIntel 82576 Gigabit ConnectionUbuntu 16.044.8.7-040807-generic (x86_64)KDE Frameworks 5X Server 1.18.4NVIDIA 375.104.5.0GCC 5.4.0 20160609 + Clang 3.8.0-2ubuntu4 + CUDA 7.51920x1080OpenBenchmarking.orgCompiler Details- 2012-07-02 14:29: --build=x86_64-linux-gnu --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-languages=c,c++,fortran,objc,obj-c++ --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-arch-32=i686 --with-tune=generic -v - AMD Opteron 6168: --build=x86_64-linux-gnu --disable-browser-plugin --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --enable-libmpx --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-arch-directory=amd64 --with-default-libstdcxx-abi=new --with-multilib-list=m32,m64,mx32 --with-tune=generic -v Environment Details- AMD Opteron 6168: wiki_indri_index=/home/jamie/lucida/tools/wiki_indri_indexProcessor Details- AMD Opteron 6168: Scaling Governor: acpi-cpufreq ondemand

paulc-48cores-nativehmmer: Pfam Database Searchmafft: Multiple Sequence Alignment2012-07-02 14:29AMD Opteron 616827.1724.7615.86OpenBenchmarking.org

Timed HMMer Search

Pfam Database Search

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Search2012-07-02 14:29612182430SE +/- 0.16, N = 327.171. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

Multiple Sequence Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignment2012-07-02 14:29AMD Opteron 6168612182430SE +/- 0.30, N = 3SE +/- 0.62, N = 624.7615.861. (CC) gcc options: -O3 -lm -lpthread

Phoronix Test Suite v10.8.4