computational-biology-intel

2 x Intel Xeon E5-2699 v3 testing with a Intel S2600WTT and Intel HD 5000 on CentOS 6.6 via the Phoronix Test Suite.

HTML result view exported from: https://openbenchmarking.org/result/1504276-KH-COMPUTATI24.

computational-biology-intelProcessorMotherboardChipsetMemoryDiskGraphicsMonitorNetworkOSKernelDisplay DriverOpenGLCompilerFile-SystemScreen Resolutiongcc51-on-intel2 x Intel Xeon E5-2699 v3 @ 3.60GHz (72 Cores)Intel S2600WTTIntel Xeon E5 v3/Core194560MB1000GB Western Digital WD1003FZEX-0Intel HD 5000hp L1730Intel 10-Gigabit X540-AT2CentOS 6.63.10.72-1.el6.elrepo.x86_64 (x86_64)modesetting 0.8.01.4GCC 5.1.0nfs1440x877OpenBenchmarking.org- --disable-multilib --disable-nls --disable-werror --enable-checking=release --enable-host-shared --enable-languages=c,c++,objc,obj-c++,fortran,go,jit --enable-libstdcxx-time=yes --enable-lto --enable-plugin --enable-stage1-checking --with-boot-ldflags='-static-libstdc++ --with-build-time-tools=/data/linuxbrew/Cellar/binutils/2.25/x86_64-unknown-linux-gnu/bin --with-fortran --with-glibc --with-gmp=/data/linuxbrew/opt/gmp --with-go --with-jit' --with-mpc=/data/linuxbrew/opt/libmpc --with-mpfr=/data/linuxbrew/opt/mpfr --with-native-system-header-dir=/data/linuxbrew/include --with-stage1-ldflags='-static-libstdc++ -L/data/linuxbrew/lib -L/data/linuxbrew/lib -L/data/linuxbrew/opt/isl014/lib -L/data/linuxbrew/opt/isl014/lib -Wl,--dynamic-linker=/data/linuxbrew/opt/glibc/lib/ld-linux-x86-64.so.2 -Wl,--dynamic-linker=/data/linuxbrew/opt/glibc/lib/ld-linux-x86-64.so.2 -Wl,-rpath,/data/linuxbrew/lib' -Wl,-rpath,/data/linuxbrew/lib' -static-libgcc -static-libgcc - Scaling Governor: intel_pstate performance

computational-biology-intelhmmer: Pfam Database Searchmafft: Multiple Sequence Alignmentgcc51-on-intel18.1927.20OpenBenchmarking.org

Timed HMMer Search

Pfam Database Search

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchgcc51-on-intel48121620SE +/- 0.24, N = 318.191. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

Multiple Sequence Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmentgcc51-on-intel612182430SE +/- 0.86, N = 627.201. (CC) gcc options: -O3 -lm -lpthread

Phoronix Test Suite v10.8.4