compbiotest

4 x AMD Opteron 6328 testing with a Supermicro H8QG6 and Matrox s MGA G200eW WPCM450 on Ubuntu 14.04 via the Phoronix Test Suite.

HTML result view exported from: https://openbenchmarking.org/result/1406105-SO-COMPBIOTE65.

compbiotestProcessorMotherboardChipsetMemoryDiskGraphicsMonitorNetworkOSKernelDisplay DriverCompilerFile-SystemScreen Resolutioncompbiotest-6-10-144 x AMD Opteron 6328 @ 3.20GHz (32 Cores)Supermicro H8QG6AMD RD890 + SB7x0/SB8x0/SB9x0121856MB120GB INTEL SSDSA2CW12 + 3 x 2000GB Hitachi HDS72202 + 2 x 2000GB Seagate ST32000641AS + 2000GB Hitachi HDS72302Matrox s MGA G200eW WPCM450DELL E190SIntel 82576 Gigabit ConnectionUbuntu 14.043.13.0-29-generic (x86_64)modesetting 0.8.1GCC 4.8ext41280x1024OpenBenchmarking.org- --build=x86_64-linux-gnu --disable-browser-plugin --disable-libmudflap --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,c++,java,go,d,fortran,objc,obj-c++ --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-arch-directory=amd64 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-4.8-amd64/jre --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-4.8-amd64 --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-4.8-amd64 --with-multilib-list=m32,m64,mx32 --with-tune=generic -v - Scaling Governor: acpi-cpufreq ondemand

compbiotesthmmer: Pfam Database Searchmafft: Multiple Sequence Alignmentcompbiotest-6-10-1413.746.14OpenBenchmarking.org

Timed HMMer Search

Pfam Database Search

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchcompbiotest-6-10-1448121620SE +/- 0.09, N = 313.741. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

Multiple Sequence Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmentcompbiotest-6-10-14246810SE +/- 0.25, N = 66.141. (CC) gcc options: -O3 -lm -lpthread

Phoronix Test Suite v10.8.4