hmmer-test-result

VMware testing on Ubuntu 20.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2405149-NE-HMMERTEST98
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Result
Identifier
Performance Per
Dollar
Date
Run
  Test
  Duration
4 x Intel Core i7-8700K
May 14
  9 Minutes


hmmer-test-resultOpenBenchmarking.orgPhoronix Test Suite4 x Intel Core i7-8700K (12 Cores)Intel VMware Virtual 440BX Desktop (6.00 BIOS)Intel 440BX/ZX/DX14GB86GB VMware Virtual SVMware SVGA IIEnsoniq ES1371/ES1373Intel 82545EMUbuntu 20.046.7.6 (x86_64)GNOME Shell 3.36.9X Server 1.20.131.1.182GCC 9.4.0ext41024x768VMwareProcessorMotherboardChipsetMemoryDiskGraphicsAudioNetworkOSKernelDesktopDisplay ServerVulkanCompilerFile-SystemScreen ResolutionSystem LayerHmmer-test-result BenchmarksSystem Logs- Transparent Huge Pages: madvise- --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,gm2 --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=/build/gcc-9-9QDOt0/gcc-9-9.4.0/debian/tmp-nvptx/usr,hsa --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v - CPU Microcode: 0xde- gather_data_sampling: Unknown: Dependent on hypervisor status + itlb_multihit: KVM: Mitigation of VMX unsupported + l1tf: Mitigation of PTE Inversion + mds: Mitigation of Clear buffers; SMT Host state unknown + meltdown: Mitigation of PTI + mmio_stale_data: Mitigation of Clear buffers; SMT Host state unknown + retbleed: Mitigation of IBRS + spec_rstack_overflow: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of IBRS IBPB: conditional STIBP: disabled RSB filling PBRSB-eIBRS: Not affected + srbds: Unknown: Dependent on hypervisor status + tsx_async_abort: Not affected

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 3.3.2Pfam Database Search4 x Intel Core i7-8700K4080120160200SE +/- 0.68, N = 3166.781. (CC) gcc options: -O3 -pthread -lhmmer -leasel -lm -lmpi