Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein.

To run this test with the Phoronix Test Suite, the basic command is: phoronix-test-suite benchmark kdb424/hmmer.

Project Site

hmmer.janelia.org

Test Created

28 December 2018

Test Maintainer

Andrew Schofield 

Test Type

Processor

Test Dependencies

C/C++ Compiler Toolchain

Supported Platforms


OpenBenchmarking.orgEventsTimed HMMer Search Popularity Statisticskdb424/hmmer2021.042021.052021.062021.072021.092021.102021.112021.122022.042022.062022.072022.092022.102022.122023.012023.042023.052023.062023.072023.082023.092023.102023.112023.122024.012024.022024.031632486480
* Uploading of benchmark result data to OpenBenchmarking.org is always optional (opt-in) via the Phoronix Test Suite for users wishing to share their results publicly.
** Data based on those opting to upload their test results to OpenBenchmarking.org and users enabling the opt-in anonymous statistics reporting while running benchmarks from an Internet-connected platform.
Data updated weekly as of 28 March 2024.

Revision History

kdb424/hmmer-1.1.2   [View Source]   Fri, 28 Dec 2018 02:31:47 GMT
Transformer


Performance Metrics

This test profile is too new - it does not have enough data available on OpenBenchmarking.org yet to provide any detailed metrics.