testebioinformaticsdebian1xenserver

Xen HVM domU 4.13 testing on Debian 11 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2402133-NE-TESTEBIOI29
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Result
Identifier
Performance Per
Dollar
Date
Run
  Test
  Duration
8 x Intel Xeon E5-2620 v4
February 13
  2 Hours, 11 Minutes
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{ "title": "testebioinformaticsdebian1xenserver", "last_modified": "2024-02-13 16:51:30", "description": "Xen HVM domU 4.13 testing on Debian 11 via the Phoronix Test Suite.", "systems": { "8 x Intel Xeon E5-2620 v4": { "identifier": "8 x Intel Xeon E5-2620 v4", "hardware": { "Processor": "8 x Intel Xeon E5-2620 v4 (8 Cores)", "Motherboard": "Xen HVM domU v4.13", "Chipset": "Intel 440FX 82441FX PMC", "Memory": "3584MB", "Disk": "57GB", "Graphics": "bochs-drmdrmfb" }, "software": { "OS": "Debian 11", "Kernel": "5.10.0-28-amd64 (x86_64)", "Desktop": "GNOME Shell 3.38.6", "Display Server": "X Server + Wayland", "Compiler": "GCC 10.2.1 20210110", "File-System": "ext4", "Screen Resolution": "1024x768", "System Layer": "Xen HVM domU 4.13" }, "user": "xenserver", "timestamp": "2024-02-13 14:03:20", "client_version": "10.8.4", "data": { "compiler-configuration": "--build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-bootstrap --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --enable-libphobos-checking=release --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-link-mutex --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=\/build\/gcc-10-Km9U7s\/gcc-10-10.2.1\/debian\/tmp-nvptx\/usr,amdgcn-amdhsa=\/build\/gcc-10-Km9U7s\/gcc-10-10.2.1\/debian\/tmp-gcn\/usr,hsa --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-build-config=bootstrap-lto-lean --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v", "cpu-microcode": "0xb000040", "kernel-extra-details": "Transparent Huge Pages: always", "python": "Python 3.9.2", "security": "gather_data_sampling: Not affected + itlb_multihit: KVM: Mitigation of VMX unsupported + l1tf: Mitigation of PTE Inversion + mds: Mitigation of Clear buffers; SMT Host state unknown + meltdown: Mitigation of PTI + mmio_stale_data: Mitigation of Clear buffers; SMT Host state unknown + retbleed: Not affected + spec_rstack_overflow: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy\/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Retpolines IBPB: conditional IBRS_FW STIBP: disabled RSB filling PBRSB-eIBRS: Not affected + srbds: Not affected + tsx_async_abort: Mitigation of Clear buffers; SMT Host state unknown" } } }, "results": { "cb1efaf56752a153fcd111641c8f1fa20d3381ba": { "identifier": "pts\/himeno-1.3.0", "title": "Himeno Benchmark", "app_version": "3.0", "description": "Poisson Pressure Solver", "scale": "MFLOPS", "proportion": "HIB", "display_format": "BAR_GRAPH", "results": { "8 x Intel Xeon E5-2620 v4": { "value": 2850.96487999999999374267645180225372314453125, "raw_values": [ 2854.45070699999996577389538288116455078125, 2859.56618200000002616434358060359954833984375, 2838.87775000000010550138540565967559814453125 ], "test_run_times": [ 56.89999999999999857891452847979962825775146484375, 56.82000000000000028421709430404007434844970703125, 55.46000000000000085265128291212022304534912109375 ], "details": { "compiler-options": { "compiler-type": "CC", "compiler": "gcc", "compiler-options": "-O3 -mavx2" } } } } }, "3e525eab406c2a5502618d44283abda53ce404b4": { "identifier": "pts\/hmmer-1.3.0", "title": "Timed HMMer Search", "app_version": "3.3.2", "description": "Pfam Database Search", "scale": "Seconds", "proportion": "LIB", "display_format": "BAR_GRAPH", "results": { "8 x Intel Xeon E5-2620 v4": { "value": 194.118999999999999772626324556767940521240234375, "raw_values": [ 194.981999999999999317878973670303821563720703125, 193.7259999999999990905052982270717620849609375, 193.6490000000000009094947017729282379150390625 ], "test_run_times": [ 194.979999999999989768184605054557323455810546875, 193.729999999999989768184605054557323455810546875, 193.650000000000005684341886080801486968994140625 ], "details": { "compiler-options": { "compiler-type": "CC", "compiler": "gcc", "compiler-options": "-O3 -pthread -lhmmer -leasel -lm -lmpi" } } } } }, "424bc9cd6ced54bf20e13bc511d2e8138f7d83c1": { "identifier": "pts\/qmcpack-1.7.0", "title": "QMCPACK", "app_version": "3.17.1", "arguments": "tests\/molecules\/FeCO6_b3lyp_gms vmc_long_noj.in.xml", "description": "Input: FeCO6_b3lyp_gms", "scale": "Total Execution Time - Seconds", "proportion": "LIB", "display_format": "BAR_GRAPH", "results": { "8 x Intel Xeon E5-2620 v4": { "value": 382.01999999999998181010596454143524169921875, "raw_values": [ 381.5, 381.1100000000000136424205265939235687255859375, 383.44999999999998863131622783839702606201171875 ], "test_run_times": [ 382.25, 381.68999999999999772626324556767940521240234375, 384.06000000000000227373675443232059478759765625 ], "details": { "compiler-options": { "compiler-type": "CXX", "compiler": "g++", "compiler-options": "-fopenmp -foffload=disable -finline-limit=1000 -fstrict-aliasing -funroll-all-loops -ffast-math -march=native -O3 -pthread -lm -ldl" } } } } }, "c71be365b4514d17975183c88611daba178cf899": { "identifier": "pts\/qmcpack-1.7.0", "title": "QMCPACK", "app_version": "3.17.1", "arguments": "tests\/molecules\/O_ae_pyscf_UHF vmc_long_noj.in.xml", "description": "Input: O_ae_pyscf_UHF", "scale": "Total Execution Time - Seconds", "proportion": "LIB", "display_format": "BAR_GRAPH", "results": { "8 x Intel Xeon E5-2620 v4": { "value": 374.1000000000000227373675443232059478759765625, "raw_values": [ 369.240000000000009094947017729282379150390625, 373.1000000000000227373675443232059478759765625, 379.95999999999997953636921010911464691162109375 ], "test_run_times": [ 369.81999999999999317878973670303821563720703125, 373.6299999999999954525264911353588104248046875, 380.48000000000001818989403545856475830078125 ], "details": { "compiler-options": { "compiler-type": "CXX", "compiler": "g++", "compiler-options": "-fopenmp -foffload=disable -finline-limit=1000 -fstrict-aliasing -funroll-all-loops -ffast-math -march=native -O3 -pthread -lm -ldl" } } } } }, "6172ef3566754b19ae1a5fe7212a5bce2cd232c6": { "identifier": "pts\/qmcpack-1.7.0", "title": "QMCPACK", "app_version": "3.17.1", "arguments": "build\/examples\/molecules\/H2O\/example_H2O-1-1 simple-H2O.xml", "description": "Input: simple-H2O", "scale": "Total Execution Time - Seconds", "proportion": "LIB", "display_format": "BAR_GRAPH", "results": { "8 x Intel Xeon E5-2620 v4": { "value": 57.703000000000002955857780762016773223876953125, "raw_values": [ 57.34599999999999653255144949071109294891357421875, 57.62599999999999766941982670687139034271240234375, 58.13600000000000278532752417959272861480712890625 ], "test_run_times": [ 58.0499999999999971578290569595992565155029296875, 58.1700000000000017053025658242404460906982421875, 58.71000000000000085265128291212022304534912109375 ], "details": { "compiler-options": { "compiler-type": "CXX", "compiler": "g++", "compiler-options": "-fopenmp -foffload=disable -finline-limit=1000 -fstrict-aliasing -funroll-all-loops -ffast-math -march=native -O3 -pthread -lm -ldl" } } } } }, "c5eee6b07b17b1c5f7d985afdb02e6baa02b85bb": { "identifier": "pts\/qmcpack-1.7.0", "title": "QMCPACK", "app_version": "3.17.1", "arguments": "tests\/molecules\/LiH_ae_MSD vmc_long_opt_CI.in.xml", "description": "Input: LiH_ae_MSD", "scale": "Total Execution Time - Seconds", "proportion": "LIB", "display_format": "BAR_GRAPH", "results": { "8 x Intel Xeon E5-2620 v4": { "value": 240.25, "raw_values": [ 238.6399999999999863575794734060764312744140625, 243.210000000000007958078640513122081756591796875, 238.8899999999999863575794734060764312744140625 ], "test_run_times": [ 239.6200000000000045474735088646411895751953125, 244.1299999999999954525264911353588104248046875, 239.80000000000001136868377216160297393798828125 ], "details": { "compiler-options": { "compiler-type": "CXX", "compiler": "g++", "compiler-options": "-fopenmp -foffload=disable -finline-limit=1000 -fstrict-aliasing -funroll-all-loops -ffast-math -march=native -O3 -pthread -lm -ldl" } } } } }, "5466eca7a23d1b68a94799da4d07852b9231bce4": { "identifier": "pts\/qmcpack-1.7.0", "title": "QMCPACK", "app_version": "3.17.1", "arguments": "tests\/molecules\/Li2_STO_ae Li2.STO.long.in.xml", "description": "Input: Li2_STO_ae", "scale": "Total Execution Time - Seconds", "proportion": "LIB", "display_format": "BAR_GRAPH", "results": { "8 x Intel Xeon E5-2620 v4": { "value": 637.3799999999999954525264911353588104248046875, "raw_values": [ 642.8600000000000136424205265939235687255859375, 636.9600000000000363797880709171295166015625, 632.3200000000000500222085975110530853271484375 ], "test_run_times": [ 643.450000000000045474735088646411895751953125, 637.5399999999999636202119290828704833984375, 632.8300000000000409272615797817707061767578125 ], "details": { "compiler-options": { "compiler-type": "CXX", "compiler": "g++", "compiler-options": "-fopenmp -foffload=disable -finline-limit=1000 -fstrict-aliasing -funroll-all-loops -ffast-math -march=native -O3 -pthread -lm -ldl" } } } } }, "3a381578f1031b4e4df3ce4071d1d0a644521810": { "identifier": "pts\/qmcpack-1.7.0", "title": "QMCPACK", "app_version": "3.17.1", "arguments": "tests\/molecules\/H4_ae optm-linear-linemin.xml", "description": "Input: H4_ae", "scale": "Total Execution Time - Seconds", "proportion": "LIB", "display_format": "BAR_GRAPH", "results": { "8 x Intel Xeon E5-2620 v4": { "value": 72.469999999999998863131622783839702606201171875, "raw_values": [ 74.099999999999994315658113919198513031005859375, 68.3799999999999954525264911353588104248046875, 75.840000000000003410605131648480892181396484375, 71, 70.4599999999999937472239253111183643341064453125, 78.2300000000000039790393202565610408782958984375, 78.6099999999999994315658113919198513031005859375, 68.43000000000000682121026329696178436279296875, 74.1099999999999994315658113919198513031005859375, 70.090000000000003410605131648480892181396484375, 72.650000000000005684341886080801486968994140625, 71.099999999999994315658113919198513031005859375, 75.9800000000000039790393202565610408782958984375, 69.5499999999999971578290569595992565155029296875, 68.56999999999999317878973670303821563720703125 ], "test_run_times": [ 76.6200000000000045474735088646411895751953125, 68.909999999999996589394868351519107818603515625, 76.3599999999999994315658113919198513031005859375, 71.5499999999999971578290569595992565155029296875, 70.9899999999999948840923025272786617279052734375, 78.7699999999999960209606797434389591217041015625, 79.150000000000005684341886080801486968994140625, 68.9599999999999937472239253111183643341064453125, 74.6299999999999954525264911353588104248046875, 70.6200000000000045474735088646411895751953125, 73.2099999999999937472239253111183643341064453125, 71.6299999999999954525264911353588104248046875, 76.5, 70.090000000000003410605131648480892181396484375, 69.090000000000003410605131648480892181396484375 ], "details": { "compiler-options": { "compiler-type": "CXX", "compiler": "g++", "compiler-options": "-fopenmp -foffload=disable -finline-limit=1000 -fstrict-aliasing -funroll-all-loops -ffast-math -march=native -O3 -pthread -lm -ldl" } } } } }, "d817a7a6509f51dd9a1a6b11ed9f23630ae2fc2a": { "identifier": "pts\/mrbayes-1.5.0", "title": "Timed MrBayes Analysis", "app_version": "3.2.7", "description": "Primate Phylogeny Analysis", "scale": "Seconds", "proportion": "LIB", "display_format": "BAR_GRAPH", "results": { "8 x Intel Xeon E5-2620 v4": { "value": 225.00299999999998590283212251961231231689453125, "raw_values": [ 227.30099999999998772182152606546878814697265625, 224.121000000000009322320693172514438629150390625, 223.58699999999998908606357872486114501953125 ], "test_run_times": [ 227.270000000000010231815394945442676544189453125, 224.1200000000000045474735088646411895751953125, 223.590000000000003410605131648480892181396484375 ], "details": { "compiler-options": { "compiler-type": "CC", "compiler": "gcc", "compiler-options": "-mmmx -msse -msse2 -msse3 -mssse3 -msse4.1 -msse4.2 -maes -mavx -mfma -mavx2 -mrdrnd -mbmi -mbmi2 -madx -mabm -O3 -std=c99 -pedantic -lm" } } } } }, "37c1eb326f22c6a5b95075ae2fcfc3d0d9d971d4": { "identifier": "pts\/mafft-1.6.2", "title": "Timed MAFFT Alignment", "app_version": "7.471", "scale": "Seconds", "proportion": "LIB", "display_format": "BAR_GRAPH", "results": { "8 x Intel Xeon E5-2620 v4": { "test_run_times": [ 65.3900000000000005684341886080801486968994140625, 58.6700000000000017053025658242404460906982421875, 78.8900000000000005684341886080801486968994140625 ], "details": { "compiler-options": { "compiler-type": "CC", "compiler": "gcc", "compiler-options": "-std=c99 -O3 -lm -lpthread" }, "error": "The test quit with a non-zero exit status. The test quit with a non-zero exit status. The test quit with a non-zero exit status." } } } } } }