NAMD CUDA RTX 40

AMD Ryzen 9 7950X 16-Core testing with a ASUS ROG CROSSHAIR X670E HERO (9922 BIOS) and NVIDIA GeForce RTX 4090 24GB on Ubuntu 23.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2303122-PTS-NAMDCUDA59
Jump To Table - Results

View

Do Not Show Noisy Results
Do Not Show Results With Incomplete Data
Do Not Show Results With Little Change/Spread
List Notable Results

Statistics

Show Overall Harmonic Mean(s)
Show Overall Geometric Mean
Show Wins / Losses Counts (Pie Chart)
Normalize Results
Remove Outliers Before Calculating Averages

Graph Settings

Force Line Graphs Where Applicable
Convert To Scalar Where Applicable
Disable Color Branding
Prefer Vertical Bar Graphs

Table

Show Detailed System Result Table

Run Management

Highlight
Result
Hide
Result
Result
Identifier
Performance Per
Dollar
Date
Run
  Test
  Duration
RTX 4090 a
March 12 2023
  3 Minutes
RTX 4090 b
March 12 2023
  1 Minute
RTX 4090 c
March 12 2023
  1 Minute
Invert Hiding All Results Option
  2 Minutes

Only show results where is faster than


NAMD CUDA RTX 40OpenBenchmarking.orgPhoronix Test SuiteAMD Ryzen 9 7950X 16-Core @ 4.50GHz (16 Cores / 32 Threads)ASUS ROG CROSSHAIR X670E HERO (9922 BIOS)AMD Device 14d832GBWestern Digital WD_BLACK SN850X 1000GB + 2000GBNVIDIA GeForce RTX 4090 24GBNVIDIA AD102 HD AudioASUS MG28UIntel I225-V + Intel Wi-Fi 6 AX210/AX211/AX411Ubuntu 23.046.2.2-060202-generic (x86_64)GNOME Shell 43.2X Server 1.21.1.7NVIDIA 530.30.024.6.0OpenCL 2.1 AMD-APP (3513.0) + OpenCL 3.0 CUDA 12.1.68GCC 12.2.0ext43840x2160ProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay ServerDisplay DriverOpenGLOpenCLCompilerFile-SystemScreen ResolutionNAMD CUDA RTX 40 BenchmarksSystem Logs- Transparent Huge Pages: madvise- Scaling Governor: acpi-cpufreq performance (Boost: Enabled) - CPU Microcode: 0xa601203 - BAR1 / Visible vRAM Size: 32768 MiB - vBIOS Version: 95.02.20.00.01- itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + mmio_stale_data: Not affected + retbleed: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Retpolines IBPB: conditional IBRS_FW STIBP: always-on RSB filling PBRSB-eIBRS: Not affected + srbds: Not affected + tsx_async_abort: Not affected

NAMD CUDA

NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. NAMD was developed by the Theoretical and Computational Biophysics Group in the Beckman Institute for Advanced Science and Technology at the University of Illinois at Urbana-Champaign. This version of the NAMD test profile uses CUDA GPU acceleration. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgdays/ns, Fewer Is BetterNAMD CUDA 2.14ATPase Simulation - 327,506 AtomsRTX 4090 aRTX 4090 bRTX 4090 c0.01530.03060.04590.06120.0765SE +/- 0.00011, N = 3SE +/- 0.00040, N = 3SE +/- 0.00051, N = 30.067950.068170.06756
OpenBenchmarking.orgdays/ns, Fewer Is BetterNAMD CUDA 2.14ATPase Simulation - 327,506 AtomsRTX 4090 aRTX 4090 bRTX 4090 c12345Min: 0.07 / Avg: 0.07 / Max: 0.07Min: 0.07 / Avg: 0.07 / Max: 0.07Min: 0.07 / Avg: 0.07 / Max: 0.07