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  Test
  Duration
121
November 24 2022
  13 Minutes


111OpenBenchmarking.orgPhoronix Test Suite 10.8.4Intel Xeon E5450 (1 Core)Intel 440BX (6.00 BIOS)Intel 440BX/ZX/DX1 x 2048 MB DRAM21GB Virtual diskVMware SVGA IIIntel 82545EMCentOS Linux 73.10.0-1160.62.1.el7.x86_64 (x86_64)GCC 4.8.5 20150623ext42048x1600VMwareProcessorMotherboardChipsetMemoryDiskGraphicsNetworkOSKernelCompilerFile-SystemScreen ResolutionSystem Layer111 BenchmarksSystem Logs- Transparent Huge Pages: always- --build=x86_64-redhat-linux --disable-libgcj --disable-libunwind-exceptions --enable-__cxa_atexit --enable-bootstrap --enable-checking=release --enable-gnu-indirect-function --enable-gnu-unique-object --enable-initfini-array --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-shared --enable-threads=posix --mandir=/usr/share/man --with-arch_32=x86-64 --with-linker-hash-style=gnu --with-tune=generic - CPU Microcode: 0xa0b- itlb_multihit: vulnerable + l1tf: Mitigation of PTE Inversion + mds: Vulnerable: Clear buffers attempted no microcode; SMT Host state unknown + meltdown: Mitigation of PTI + spec_store_bypass: Vulnerable + spectre_v1: Mitigation of Load fences usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Vulnerable: Retpoline without IBPB + srbds: Not affected + tsx_async_abort: Not affected

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 3.3.2Pfam Database Search12150100150200250SE +/- 1.29, N = 3241.991. (CC) gcc options: -std=gnu99 -O3 -pthread -lhmmer -leasel -lm -m64 -lmpi