bioinformatics-macbook-pro-big-sur

Apple M1 testing with a Apple MacBook Pro and Apple M1 on macOS 11.7 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2210230-PROG-BIOINFO07
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bioinformatics-macbook-pro-big-sur
October 23 2022
  13 Minutes
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bioinformatics-macbook-pro-big-sur

Processor: Apple M1 (8 Cores), Motherboard: Apple MacBook Pro, Memory: 16GB, Disk: 927GB, Graphics: Apple M1, Monitor: Color LCD

OS: macOS 11.7, Kernel: 20.6.0 (arm64), Compiler: GCC 13.0.0 + Clang 13.0.0, File-System: APFS, Screen Resolution: 2880x1800

Environment Notes: XPC_FLAGS=0x0

bioinformatics-macbook-pro-big-surOpenBenchmarking.orgPhoronix Test SuiteApple M1 (8 Cores)Apple MacBook Pro16GB927GBApple M1Color LCDmacOS 11.720.6.0 (arm64)GCC 13.0.0 + Clang 13.0.0APFS2880x1800ProcessorMotherboardMemoryDiskGraphicsMonitorOSKernelCompilerFile-SystemScreen ResolutionBioinformatics-macbook-pro-big-sur BenchmarksSystem Logs- XPC_FLAGS=0x0

bioinformatics-macbook-pro-big-surmrbayes: Primate Phylogeny Analysismafft: Multiple Sequence Alignment - LSU RNAhimeno: bioinformatics-macbook-pro-big-sur242.72311.174OpenBenchmarking.org

Timed MrBayes Analysis

This test performs a bayesian analysis of a set of primate genome sequences in order to estimate their phylogeny. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MrBayes Analysis 3.2.7Primate Phylogeny Analysisbioinformatics-macbook-pro-big-sur50100150200250SE +/- 0.41, N = 3242.721. (CC) gcc options: -O3 -std=c99 -pedantic -lm -lreadline

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

bioinformatics-macbook-pro-big-sur: The test quit with a non-zero exit status. The test quit with a non-zero exit status. The test quit with a non-zero exit status. E: mpirun was unable to launch the specified application as it could not access

Timed MAFFT Alignment

This test performs an alignment of 100 pyruvate decarboxylase sequences. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 7.471Multiple Sequence Alignment - LSU RNAbioinformatics-macbook-pro-big-sur3691215SE +/- 0.06, N = 311.171. (CC) gcc options: -std=c99 -O3 -lm -lpthread

Himeno Benchmark

The Himeno benchmark is a linear solver of pressure Poisson using a point-Jacobi method. Learn more via the OpenBenchmarking.org test page.

bioinformatics-macbook-pro-big-sur: The test quit with a non-zero exit status. The test quit with a non-zero exit status. The test quit with a non-zero exit status. E: himeno: line 2: ./himenobmtxpa: No such file or directory

bioinformatics-macbook-pro-big-sur

Processor: Apple M1 (8 Cores), Motherboard: Apple MacBook Pro, Memory: 16GB, Disk: 927GB, Graphics: Apple M1, Monitor: Color LCD

OS: macOS 11.7, Kernel: 20.6.0 (arm64), Compiler: GCC 13.0.0 + Clang 13.0.0, File-System: APFS, Screen Resolution: 2880x1800

Environment Notes: XPC_FLAGS=0x0

Testing initiated at 23 October 2022 06:07 by user progdan.