molecular-dynamics_230521
AMD Ryzen 7 5800X 8-Core testing with a MSI MAG X570 TOMAHAWK WIFI (MS-7C84) v1.0 (1.50 BIOS) and ASUS NVIDIA GeForce GTX 1050 Ti 4GB on Neon 20.04 via the Phoronix Test Suite.
molecular-dynamics_230521
Processor: AMD Ryzen 7 5800X 8-Core @ 4.20GHz (8 Cores / 16 Threads), Motherboard: MSI MAG X570 TOMAHAWK WIFI (MS-7C84) v1.0 (1.50 BIOS), Chipset: AMD Starship/Matisse, Memory: 16GB, Disk: 1000GB Corsair MP400 + 3001GB My Book 1140 + 4001GB My Book 25EE, Graphics: ASUS NVIDIA GeForce GTX 1050 Ti 4GB, Audio: NVIDIA GP107GL HD Audio, Monitor: DELL S2721QS, Network: Realtek RTL8125 2.5GbE + Intel Wi-Fi 6 AX200
OS: Neon 20.04, Kernel: 5.4.0-73-generic (x86_64), Desktop: KDE Plasma 5.21.5, Display Server: X Server 1.20.9, Display Driver: NVIDIA 460.73.01, OpenGL: 4.6.0, OpenCL: OpenCL 1.2 CUDA 11.2.162, Vulkan: 1.2.155, Compiler: GCC 9.3.0, File-System: ext4, Screen Resolution: 3840x2160
Kernel Notes: Transparent Huge Pages: madvise
Compiler Notes: --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,gm2 --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=/build/gcc-9-HskZEa/gcc-9-9.3.0/debian/tmp-nvptx/usr,hsa --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v
Processor Notes: Scaling Governor: acpi-cpufreq ondemand (Boost: Enabled) - CPU Microcode: 0xa201009
Security Notes: itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional IBRS_FW STIBP: always-on RSB filling + srbds: Not affected + tsx_async_abort: Not affected
miniFE
MiniFE Finite Element is an application for unstructured implicit finite element codes. Learn more via the OpenBenchmarking.org test page.
GROMACS
The GROMACS (GROningen MAchine for Chemical Simulations) molecular dynamics package testing with the water_GMX50 data. This test profile allows selecting between CPU and GPU-based GROMACS builds. Learn more via the OpenBenchmarking.org test page.
LAMMPS Molecular Dynamics Simulator
LAMMPS is a classical molecular dynamics code, and an acronym for Large-scale Atomic/Molecular Massively Parallel Simulator. Learn more via the OpenBenchmarking.org test page.
NAMD
NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. NAMD was developed by the Theoretical and Computational Biophysics Group in the Beckman Institute for Advanced Science and Technology at the University of Illinois at Urbana-Champaign. Learn more via the OpenBenchmarking.org test page.
Pennant
Pennant is an application focused on hydrodynamics on general unstructured meshes in 2D. Learn more via the OpenBenchmarking.org test page.
CloverLeaf
CloverLeaf is a Lagrangian-Eulerian hydrodynamics benchmark. This test profile currently makes use of CloverLeaf's OpenMP version and benchmarked with the clover_bm.in input file (Problem 5). Learn more via the OpenBenchmarking.org test page.
CP2K Molecular Dynamics
CP2K is an open-source molecular dynamics software package focused on quantum chemistry and solid-state physics. Learn more via the OpenBenchmarking.org test page.
Dolfyn
Dolfyn is a Computational Fluid Dynamics (CFD) code of modern numerical simulation techniques. The Dolfyn test profile measures the execution time of the bundled computational fluid dynamics demos that are bundled with Dolfyn. Learn more via the OpenBenchmarking.org test page.
Xcompact3d Incompact3d
Xcompact3d Incompact3d is a Fortran-MPI based, finite difference high-performance code for solving the incompressible Navier-Stokes equation and as many as you need scalar transport equations. Learn more via the OpenBenchmarking.org test page.
OpenFOAM
OpenFOAM is the leading free, open source software for computational fluid dynamics (CFD). Learn more via the OpenBenchmarking.org test page.
molecular-dynamics_230521
Processor: AMD Ryzen 7 5800X 8-Core @ 4.20GHz (8 Cores / 16 Threads), Motherboard: MSI MAG X570 TOMAHAWK WIFI (MS-7C84) v1.0 (1.50 BIOS), Chipset: AMD Starship/Matisse, Memory: 16GB, Disk: 1000GB Corsair MP400 + 3001GB My Book 1140 + 4001GB My Book 25EE, Graphics: ASUS NVIDIA GeForce GTX 1050 Ti 4GB, Audio: NVIDIA GP107GL HD Audio, Monitor: DELL S2721QS, Network: Realtek RTL8125 2.5GbE + Intel Wi-Fi 6 AX200
OS: Neon 20.04, Kernel: 5.4.0-73-generic (x86_64), Desktop: KDE Plasma 5.21.5, Display Server: X Server 1.20.9, Display Driver: NVIDIA 460.73.01, OpenGL: 4.6.0, OpenCL: OpenCL 1.2 CUDA 11.2.162, Vulkan: 1.2.155, Compiler: GCC 9.3.0, File-System: ext4, Screen Resolution: 3840x2160
Kernel Notes: Transparent Huge Pages: madvise
Compiler Notes: --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,gm2 --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=/build/gcc-9-HskZEa/gcc-9-9.3.0/debian/tmp-nvptx/usr,hsa --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v
Processor Notes: Scaling Governor: acpi-cpufreq ondemand (Boost: Enabled) - CPU Microcode: 0xa201009
Security Notes: itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional IBRS_FW STIBP: always-on RSB filling + srbds: Not affected + tsx_async_abort: Not affected
Testing initiated at 23 May 2021 17:12 by user hubbi.