3200u may 6

AMD Ryzen 3 3200U testing with a MOTILE PF4PU1F (N.1.03 BIOS) and AMD Picasso 512MB on Ubuntu 20.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2105064-IB-3200UMAY669
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Bioinformatics 3 Tests
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May 06 2021
  24 Minutes
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May 06 2021
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May 06 2021
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1

Kernel Notes: Transparent Huge Pages: madvise
Compiler Notes: --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,gm2 --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=/build/gcc-9-HskZEa/gcc-9-9.3.0/debian/tmp-nvptx/usr,hsa --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v
Processor Notes: Scaling Governor: acpi-cpufreq ondemand (Boost: Enabled) - CPU Microcode: 0x8108102
Python Notes: Python 3.8.5
Security Notes: itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional STIBP: disabled RSB filling + srbds: Not affected + tsx_async_abort: Not affected

2

3

Processor: AMD Ryzen 3 3200U @ 2.60GHz (2 Cores / 4 Threads), Motherboard: MOTILE PF4PU1F (N.1.03 BIOS), Chipset: AMD Raven/Raven2, Memory: 3584MB, Disk: 128GB BIWIN SSD, Graphics: AMD Picasso 512MB (1200/1200MHz), Audio: AMD Raven/Raven2/Fenghuang, Network: Realtek RTL8111/8168/8411 + Intel Dual Band-AC 3168NGW

OS: Ubuntu 20.04, Kernel: 5.8.0-50-generic (x86_64), Desktop: GNOME Shell 3.36.4, Display Server: X Server 1.20.9, OpenGL: 4.6 Mesa 20.0.8 (LLVM 10.0.0), Compiler: GCC 9.3.0, File-System: ext4, Screen Resolution: 1920x1080

3200u may 6ProcessorMotherboardChipsetMemoryDiskGraphicsAudioNetworkOSKernelDesktopDisplay ServerOpenGLCompilerFile-SystemScreen Resolution123AMD Ryzen 3 3200U @ 2.60GHz (2 Cores / 4 Threads)MOTILE PF4PU1F (N.1.03 BIOS)AMD Raven/Raven23584MB128GB BIWIN SSDAMD Picasso 512MB (1200/1200MHz)AMD Raven/Raven2/FenghuangRealtek RTL8111/8168/8411 + Intel Dual Band-AC 3168NGWUbuntu 20.045.8.0-50-generic (x86_64)GNOME Shell 3.36.4X Server 1.20.94.6 Mesa 20.0.8 (LLVM 10.0.0)GCC 9.3.0ext41920x1080OpenBenchmarking.orgKernel Details- Transparent Huge Pages: madviseCompiler Details- --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,gm2 --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=/build/gcc-9-HskZEa/gcc-9-9.3.0/debian/tmp-nvptx/usr,hsa --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v Processor Details- Scaling Governor: acpi-cpufreq ondemand (Boost: Enabled) - CPU Microcode: 0x8108102 Python Details- Python 3.8.5Security Details- itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional STIBP: disabled RSB filling + srbds: Not affected + tsx_async_abort: Not affected

123Result OverviewPhoronix Test Suite100%100%101%101%Timed MrBayes AnalysisChia Blockchain VDFQMCPACKTimed HMMer SearchHelsingChia Blockchain VDFP.P.AS.A.Osimple-H2OP.D.S12 digitSquare Plain C++

3200u may 6mrbayes: Primate Phylogeny Analysisqmcpack: simple-H2Ohmmer: Pfam Database Searchchia-vdf: Square Plain C++chia-vdf: Square Assembly Optimizedhelsing: 12 digit123178.05141.679148.37512770013486732.801180.56842.095148.89212726713400032.871179.41541.669149.37312756713350032.938OpenBenchmarking.org

Timed MrBayes Analysis

This test performs a bayesian analysis of a set of primate genome sequences in order to estimate their phylogeny. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MrBayes Analysis 3.2.7Primate Phylogeny Analysis1234080120160200SE +/- 2.15, N = 3SE +/- 0.78, N = 3SE +/- 1.00, N = 3178.05180.57179.421. (CC) gcc options: -mmmx -msse -msse2 -msse3 -mssse3 -msse4.1 -msse4.2 -msse4a -msha -maes -mavx -mfma -mavx2 -mrdrnd -mbmi -mbmi2 -madx -mabm -O3 -std=c99 -pedantic -lm
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MrBayes Analysis 3.2.7Primate Phylogeny Analysis123306090120150Min: 174.13 / Avg: 178.05 / Max: 181.54Min: 179.47 / Avg: 180.57 / Max: 182.09Min: 178.15 / Avg: 179.42 / Max: 181.391. (CC) gcc options: -mmmx -msse -msse2 -msse3 -mssse3 -msse4.1 -msse4.2 -msse4a -msha -maes -mavx -mfma -mavx2 -mrdrnd -mbmi -mbmi2 -madx -mabm -O3 -std=c99 -pedantic -lm

QMCPACK

QMCPACK is a modern high-performance open-source Quantum Monte Carlo (QMC) simulation code making use of MPI for this benchmark of the H20 example code. QMCPACK is an open-source production level many-body ab initio Quantum Monte Carlo code for computing the electronic structure of atoms, molecules, and solids. QMCPACK is supported by the U.S. Department of Energy. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgTotal Execution Time - Seconds, Fewer Is BetterQMCPACK 3.11Input: simple-H2O1231020304050SE +/- 0.49, N = 3SE +/- 0.63, N = 3SE +/- 0.39, N = 341.6842.1041.671. (CXX) g++ options: -fopenmp -finline-limit=1000 -fstrict-aliasing -funroll-all-loops -march=native -O3 -fomit-frame-pointer -ffast-math -pthread -lm
OpenBenchmarking.orgTotal Execution Time - Seconds, Fewer Is BetterQMCPACK 3.11Input: simple-H2O123918273645Min: 40.84 / Avg: 41.68 / Max: 42.53Min: 40.92 / Avg: 42.1 / Max: 43.08Min: 40.91 / Avg: 41.67 / Max: 42.241. (CXX) g++ options: -fopenmp -finline-limit=1000 -fstrict-aliasing -funroll-all-loops -march=native -O3 -fomit-frame-pointer -ffast-math -pthread -lm

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 3.3.2Pfam Database Search123306090120150SE +/- 0.03, N = 3SE +/- 0.21, N = 3SE +/- 0.82, N = 3148.38148.89149.371. (CC) gcc options: -O3 -pthread -lhmmer -leasel -lm -lmpi
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 3.3.2Pfam Database Search123306090120150Min: 148.35 / Avg: 148.38 / Max: 148.43Min: 148.63 / Avg: 148.89 / Max: 149.3Min: 148.35 / Avg: 149.37 / Max: 150.981. (CC) gcc options: -O3 -pthread -lhmmer -leasel -lm -lmpi

Chia Blockchain VDF

Chia is a blockchain and smart transaction platform based on proofs of space and time rather than proofs of work with other cryptocurrencies. This test profile is benchmarking the CPU performance for Chia VDF performance using the Chia VDF benchmark. The Chia VDF is for the Chia Verifiable Delay Function (Proof of Time). Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgIPS, More Is BetterChia Blockchain VDF 1.0.1Test: Square Plain C++12330K60K90K120K150KSE +/- 360.56, N = 3SE +/- 202.76, N = 3SE +/- 166.67, N = 31277001272671275671. (CXX) g++ options: -flto -no-pie -lgmpxx -lgmp -lboost_system -pthread
OpenBenchmarking.orgIPS, More Is BetterChia Blockchain VDF 1.0.1Test: Square Plain C++12320K40K60K80K100KMin: 127000 / Avg: 127700 / Max: 128200Min: 126900 / Avg: 127266.67 / Max: 127600Min: 127400 / Avg: 127566.67 / Max: 1279001. (CXX) g++ options: -flto -no-pie -lgmpxx -lgmp -lboost_system -pthread

OpenBenchmarking.orgIPS, More Is BetterChia Blockchain VDF 1.0.1Test: Square Assembly Optimized12330K60K90K120K150KSE +/- 2162.05, N = 3SE +/- 1703.92, N = 3SE +/- 984.89, N = 31348671340001335001. (CXX) g++ options: -flto -no-pie -lgmpxx -lgmp -lboost_system -pthread
OpenBenchmarking.orgIPS, More Is BetterChia Blockchain VDF 1.0.1Test: Square Assembly Optimized12320K40K60K80K100KMin: 131700 / Avg: 134866.67 / Max: 139000Min: 132100 / Avg: 134000 / Max: 137400Min: 132100 / Avg: 133500 / Max: 1354001. (CXX) g++ options: -flto -no-pie -lgmpxx -lgmp -lboost_system -pthread

Helsing

Helsing is an open-source POSIX vampire number generator. This test profile measures the time it takes to generate vampire numbers between varying numbers of digits. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterHelsing 1.0-betaDigit Range: 12 digit123816243240SE +/- 0.11, N = 3SE +/- 0.13, N = 3SE +/- 0.12, N = 332.8032.8732.941. (CC) gcc options: -O2 -pthread
OpenBenchmarking.orgSeconds, Fewer Is BetterHelsing 1.0-betaDigit Range: 12 digit123714212835Min: 32.59 / Avg: 32.8 / Max: 32.96Min: 32.64 / Avg: 32.87 / Max: 33.08Min: 32.71 / Avg: 32.94 / Max: 33.141. (CC) gcc options: -O2 -pthread

1

Kernel Notes: Transparent Huge Pages: madvise
Compiler Notes: --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,gm2 --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=/build/gcc-9-HskZEa/gcc-9-9.3.0/debian/tmp-nvptx/usr,hsa --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v
Processor Notes: Scaling Governor: acpi-cpufreq ondemand (Boost: Enabled) - CPU Microcode: 0x8108102
Python Notes: Python 3.8.5
Security Notes: itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional STIBP: disabled RSB filling + srbds: Not affected + tsx_async_abort: Not affected

Testing initiated at 6 May 2021 08:09 by user phoronix.

2

Kernel Notes: Transparent Huge Pages: madvise
Compiler Notes: --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,gm2 --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=/build/gcc-9-HskZEa/gcc-9-9.3.0/debian/tmp-nvptx/usr,hsa --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v
Processor Notes: Scaling Governor: acpi-cpufreq ondemand (Boost: Enabled) - CPU Microcode: 0x8108102
Python Notes: Python 3.8.5
Security Notes: itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional STIBP: disabled RSB filling + srbds: Not affected + tsx_async_abort: Not affected

Testing initiated at 6 May 2021 08:50 by user phoronix.

3

Processor: AMD Ryzen 3 3200U @ 2.60GHz (2 Cores / 4 Threads), Motherboard: MOTILE PF4PU1F (N.1.03 BIOS), Chipset: AMD Raven/Raven2, Memory: 3584MB, Disk: 128GB BIWIN SSD, Graphics: AMD Picasso 512MB (1200/1200MHz), Audio: AMD Raven/Raven2/Fenghuang, Network: Realtek RTL8111/8168/8411 + Intel Dual Band-AC 3168NGW

OS: Ubuntu 20.04, Kernel: 5.8.0-50-generic (x86_64), Desktop: GNOME Shell 3.36.4, Display Server: X Server 1.20.9, OpenGL: 4.6 Mesa 20.0.8 (LLVM 10.0.0), Compiler: GCC 9.3.0, File-System: ext4, Screen Resolution: 1920x1080

Kernel Notes: Transparent Huge Pages: madvise
Compiler Notes: --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,gm2 --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=/build/gcc-9-HskZEa/gcc-9-9.3.0/debian/tmp-nvptx/usr,hsa --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v
Processor Notes: Scaling Governor: acpi-cpufreq ondemand (Boost: Enabled) - CPU Microcode: 0x8108102
Python Notes: Python 3.8.5
Security Notes: itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional STIBP: disabled RSB filling + srbds: Not affected + tsx_async_abort: Not affected

Testing initiated at 6 May 2021 09:42 by user phoronix.