bioinformatics_test
AMD Ryzen Threadripper 3970X 32-Core testing with a ASRock TRX40 Creator (P1.70 BIOS) and Gigabyte NVIDIA GeForce RTX 2080 Ti 11GB on Debian 10 via the Phoronix Test Suite.
AMD Ryzen Threadripper 3970X 32-Core
Processor: AMD Ryzen Threadripper 3970X 32-Core @ 3.70GHz (32 Cores / 64 Threads), Motherboard: ASRock TRX40 Creator (P1.70 BIOS), Chipset: AMD Starship/Matisse, Memory: 2 x 32 GB DDR4-3200MT/s TEAMGROUP-UD4-3200, Disk: Samsung SSD 970 EVO 500GB + 2000GB Western Digital WD20EFAX-68F, Graphics: Gigabyte NVIDIA GeForce RTX 2080 Ti 11GB, Audio: NVIDIA TU102 HD Audio, Monitor: DELL E176FP, Network: Aquantia AQC107 NBase-T/IEEE + Realtek Device 8125 + Intel Device 2723
OS: Debian 10, Kernel: 4.19.0-16-amd64 (x86_64), Desktop: GNOME Shell 3.30.2, Display Server: X Server 1.20.4, Display Driver: NVIDIA 460.67, OpenGL: 4.6.0, Vulkan: 1.2.155, Compiler: GCC 8.3.0 + CUDA 11.2, File-System: ext4, Screen Resolution: 1280x1024
Kernel Notes: Transparent Huge Pages: always
Compiler Notes: --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-bootstrap --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++ --enable-libmpx --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib --with-tune=generic --without-cuda-driver -v
Processor Notes: Scaling Governor: acpi-cpufreq ondemand (Boost: Enabled) - CPU Microcode: 0x8301039
Security Notes: itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional STIBP: conditional RSB filling + srbds: Not affected + tsx_async_abort: Not affected
Himeno Benchmark
The Himeno benchmark is a linear solver of pressure Poisson using a point-Jacobi method. Learn more via the OpenBenchmarking.org test page.
Timed MrBayes Analysis
This test performs a bayesian analysis of a set of primate genome sequences in order to estimate their phylogeny. Learn more via the OpenBenchmarking.org test page.
Timed HMMer Search
This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.
Timed MAFFT Alignment
This test performs an alignment of 100 pyruvate decarboxylase sequences. Learn more via the OpenBenchmarking.org test page.
AMD Ryzen Threadripper 3970X 32-Core
Processor: AMD Ryzen Threadripper 3970X 32-Core @ 3.70GHz (32 Cores / 64 Threads), Motherboard: ASRock TRX40 Creator (P1.70 BIOS), Chipset: AMD Starship/Matisse, Memory: 2 x 32 GB DDR4-3200MT/s TEAMGROUP-UD4-3200, Disk: Samsung SSD 970 EVO 500GB + 2000GB Western Digital WD20EFAX-68F, Graphics: Gigabyte NVIDIA GeForce RTX 2080 Ti 11GB, Audio: NVIDIA TU102 HD Audio, Monitor: DELL E176FP, Network: Aquantia AQC107 NBase-T/IEEE + Realtek Device 8125 + Intel Device 2723
OS: Debian 10, Kernel: 4.19.0-16-amd64 (x86_64), Desktop: GNOME Shell 3.30.2, Display Server: X Server 1.20.4, Display Driver: NVIDIA 460.67, OpenGL: 4.6.0, Vulkan: 1.2.155, Compiler: GCC 8.3.0 + CUDA 11.2, File-System: ext4, Screen Resolution: 1280x1024
Kernel Notes: Transparent Huge Pages: always
Compiler Notes: --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-bootstrap --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++ --enable-libmpx --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib --with-tune=generic --without-cuda-driver -v
Processor Notes: Scaling Governor: acpi-cpufreq ondemand (Boost: Enabled) - CPU Microcode: 0x8301039
Security Notes: itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional STIBP: conditional RSB filling + srbds: Not affected + tsx_async_abort: Not affected
Testing initiated at 6 April 2021 21:38 by user root.