ngsice gromacs 2950X

AMD Ryzen Threadripper 2950X 16-Core testing with a MSI MEG X399 CREATION (MS-7B92) v1.0 (1.30 BIOS) and AMD FirePro V4900 1GB on Debian 10 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2102097-HA-NGSICEGRO05
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February 09 2021
  32 Minutes
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February 09 2021
  32 Minutes
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February 09 2021
  27 Minutes
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1

Kernel Notes: Transparent Huge Pages: madvise
Compiler Notes: --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-bootstrap --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++ --enable-libmpx --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib --with-tune=generic --without-cuda-driver -v
Processor Notes: Scaling Governor: acpi-cpufreq performance (Boost: Enabled) - CPU Microcode: 0x800820b
Security Notes: itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional STIBP: disabled RSB filling + srbds: Not affected + tsx_async_abort: Not affected

2

3

Processor: AMD Ryzen Threadripper 2950X 16-Core @ 3.50GHz (16 Cores / 32 Threads), Motherboard: MSI MEG X399 CREATION (MS-7B92) v1.0 (1.30 BIOS), Chipset: AMD 17h, Memory: 32GB, Disk: Samsung SSD 970 EVO 250GB, Graphics: AMD FirePro V4900 1GB, Audio: Realtek ALC1220, Monitor: VA2431, Network: 2 x Intel I211 + Intel-AC 9260

OS: Debian 10, Kernel: 5.8.1-050801-generic (x86_64), Desktop: GNOME Shell 3.30.2, Display Server: X Server 1.20.4 + Wayland, OpenGL: 3.3 Mesa 18.3.6 (LLVM 7.0.1), Compiler: GCC 8.3.0, File-System: ext4, Screen Resolution: 1920x1080

ngsice gromacs 2950XProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay ServerOpenGLCompilerFile-SystemScreen Resolution123AMD Ryzen Threadripper 2950X 16-Core @ 3.50GHz (16 Cores / 32 Threads)MSI MEG X399 CREATION (MS-7B92) v1.0 (1.30 BIOS)AMD 17h32GBSamsung SSD 970 EVO 250GBAMD FirePro V4900 1GBRealtek ALC1220VA24312 x Intel I211 + Intel-AC 9260Debian 105.8.1-050801-generic (x86_64)GNOME Shell 3.30.2X Server 1.20.4 + Wayland3.3 Mesa 18.3.6 (LLVM 7.0.1)GCC 8.3.0ext41920x1080OpenBenchmarking.orgKernel Details- Transparent Huge Pages: madviseCompiler Details- --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-bootstrap --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++ --enable-libmpx --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib --with-tune=generic --without-cuda-driver -v Processor Details- Scaling Governor: acpi-cpufreq performance (Boost: Enabled) - CPU Microcode: 0x800820bSecurity Details- itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional STIBP: disabled RSB filling + srbds: Not affected + tsx_async_abort: Not affected

123Result OverviewPhoronix Test Suite100%102%105%107%109%NgspiceNgspiceGROMACSC7552C2670water_GMX50_bare

Ngspice

Ngspice is an open-source SPICE circuit simulator. Ngspice was originally based on the Berkeley SPICE electronic circuit simulator. Ngspice supports basic threading using OpenMP. This test profile is making use of the ISCAS 85 benchmark circuits. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterNgspice 34Circuit: C26701234080120160200SE +/- 1.15, N = 3SE +/- 2.20, N = 5SE +/- 0.65, N = 3168.88171.15169.221. (CC) gcc options: -O0 -fopenmp -lm -lstdc++ -lfftw3 -lXaw -lXmu -lXt -lXext -lX11 -lSM -lICE
OpenBenchmarking.orgSeconds, Fewer Is BetterNgspice 34Circuit: C2670123306090120150Min: 167.05 / Avg: 168.88 / Max: 170.99Min: 167.85 / Avg: 171.14 / Max: 179.78Min: 167.94 / Avg: 169.22 / Max: 170.081. (CC) gcc options: -O0 -fopenmp -lm -lstdc++ -lfftw3 -lXaw -lXmu -lXt -lXext -lX11 -lSM -lICE

OpenBenchmarking.orgSeconds, Fewer Is BetterNgspice 34Circuit: C75521234080120160200SE +/- 2.18, N = 5SE +/- 1.91, N = 3SE +/- 2.46, N = 3173.03184.02188.561. (CC) gcc options: -O0 -fopenmp -lm -lstdc++ -lfftw3 -lXaw -lXmu -lXt -lXext -lX11 -lSM -lICE
OpenBenchmarking.orgSeconds, Fewer Is BetterNgspice 34Circuit: C7552123306090120150Min: 166.71 / Avg: 173.03 / Max: 178.48Min: 181.85 / Avg: 184.02 / Max: 187.83Min: 184.84 / Avg: 188.56 / Max: 193.211. (CC) gcc options: -O0 -fopenmp -lm -lstdc++ -lfftw3 -lXaw -lXmu -lXt -lXext -lX11 -lSM -lICE

GROMACS

The GROMACS (GROningen MAchine for Chemical Simulations) molecular dynamics package testing on the CPU with the water_GMX50 data. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgNs Per Day, More Is BetterGROMACS 2021Input: water_GMX50_bare1230.25740.51480.77221.02961.287SE +/- 0.001, N = 3SE +/- 0.003, N = 3SE +/- 0.003, N = 31.1441.1401.1431. (CXX) g++ options: -O3 -pthread
OpenBenchmarking.orgNs Per Day, More Is BetterGROMACS 2021Input: water_GMX50_bare123246810Min: 1.14 / Avg: 1.14 / Max: 1.15Min: 1.14 / Avg: 1.14 / Max: 1.15Min: 1.14 / Avg: 1.14 / Max: 1.151. (CXX) g++ options: -O3 -pthread

1

Kernel Notes: Transparent Huge Pages: madvise
Compiler Notes: --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-bootstrap --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++ --enable-libmpx --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib --with-tune=generic --without-cuda-driver -v
Processor Notes: Scaling Governor: acpi-cpufreq performance (Boost: Enabled) - CPU Microcode: 0x800820b
Security Notes: itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional STIBP: disabled RSB filling + srbds: Not affected + tsx_async_abort: Not affected

Testing initiated at 9 February 2021 14:58 by user phoronix.

2

Kernel Notes: Transparent Huge Pages: madvise
Compiler Notes: --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-bootstrap --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++ --enable-libmpx --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib --with-tune=generic --without-cuda-driver -v
Processor Notes: Scaling Governor: acpi-cpufreq performance (Boost: Enabled) - CPU Microcode: 0x800820b
Security Notes: itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional STIBP: disabled RSB filling + srbds: Not affected + tsx_async_abort: Not affected

Testing initiated at 9 February 2021 15:49 by user phoronix.

3

Processor: AMD Ryzen Threadripper 2950X 16-Core @ 3.50GHz (16 Cores / 32 Threads), Motherboard: MSI MEG X399 CREATION (MS-7B92) v1.0 (1.30 BIOS), Chipset: AMD 17h, Memory: 32GB, Disk: Samsung SSD 970 EVO 250GB, Graphics: AMD FirePro V4900 1GB, Audio: Realtek ALC1220, Monitor: VA2431, Network: 2 x Intel I211 + Intel-AC 9260

OS: Debian 10, Kernel: 5.8.1-050801-generic (x86_64), Desktop: GNOME Shell 3.30.2, Display Server: X Server 1.20.4 + Wayland, OpenGL: 3.3 Mesa 18.3.6 (LLVM 7.0.1), Compiler: GCC 8.3.0, File-System: ext4, Screen Resolution: 1920x1080

Kernel Notes: Transparent Huge Pages: madvise
Compiler Notes: --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-bootstrap --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++ --enable-libmpx --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib --with-tune=generic --without-cuda-driver -v
Processor Notes: Scaling Governor: acpi-cpufreq performance (Boost: Enabled) - CPU Microcode: 0x800820b
Security Notes: itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional STIBP: disabled RSB filling + srbds: Not affected + tsx_async_abort: Not affected

Testing initiated at 9 February 2021 16:22 by user phoronix.