ryzen 9 5900x compute

AMD Ryzen 9 5900X 12-Core testing with a ASUS ROG CROSSHAIR VIII HERO (3202 BIOS) and Sapphire AMD Radeon RX 5600 OEM/5600 XT / 5700/5700 6GB on Ubuntu 20.10 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2101248-HA-RYZEN959065
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ryzen 9 5900x computeProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay ServerDisplay DriverOpenGLVulkanCompilerFile-SystemScreen Resolution123AMD Ryzen 9 5900X 12-Core @ 3.70GHz (12 Cores / 24 Threads)ASUS ROG CROSSHAIR VIII HERO (3202 BIOS)AMD Starship/Matisse16GB1000GB Samsung SSD 980 PRO 1TBSapphire AMD Radeon RX 5600 OEM/5600 XT / 5700/5700 6GB (1780/875MHz)AMD Navi 10 HDMI AudioASUS VP28URealtek RTL8125 2.5GbE + Intel I211Ubuntu 20.105.8.0-38-generic (x86_64)GNOME Shell 3.38.1X Server 1.20.9modesetting 1.20.94.6 Mesa 20.2.1 (LLVM 11.0.0)1.2.131GCC 10.2.0ext43840x2160OpenBenchmarking.orgKernel Details- Transparent Huge Pages: madviseCompiler Details- --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --enable-libphobos-checking=release --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=/build/gcc-10-JvwpWM/gcc-10-10.2.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-10-JvwpWM/gcc-10-10.2.0/debian/tmp-gcn/usr,hsa --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v Processor Details- Scaling Governor: acpi-cpufreq ondemand (Boost: Enabled) - CPU Microcode: 0xa201009Python Details- 1: Python 3.8.6Security Details- itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional IBRS_FW STIBP: always-on RSB filling + srbds: Not affected + tsx_async_abort: Not affected

123Result OverviewPhoronix Test Suite 10.4.0m1100%101%101%102%CloverLeafCP2K Molecular DynamicsDolfynRodiniaNAS Parallel BenchmarksNAMDminiFEPennant

ryzen 9 5900x computecloverleaf: Lagrangian-Eulerian Hydrodynamicsdolfyn: Computational Fluid Dynamicscp2k: Fayalite-FIST Datalammps: Rhodopsin Proteinmafft: Multiple Sequence Alignment - LSU RNAnpb: LU.Cnwchem: C240 Buckyballlulesh: himeno: Poisson Pressure Solveropenfoam: Motorbike 30Mlammps: 20k Atomsnpb: EP.Dincompact3d: Cylindernamd: ATPase Simulation - 327,506 Atomsminife: Smallrodinia: OpenMP Streamclusternpb: EP.Crodinia: OpenMP Leukocyteqe: AUSURF112hmmer: Pfam Database Searchrodinia: OpenMP CFD Solverrodinia: OpenMP LavaMDopenfoam: Motorbike 60Mpennant: sedovbiggromacs: Water Benchmarkmrbayes: Primate Phylogeny Analysisqmcpack: simple-H2Opennant: leblancbigrodinia: OpenMP HotSpot3D123125.7313.439779.64610.4277.37927079.43110865197.43365210.61021197.5310.6131460.31227.7608901.293984290.6821.8641477.4671.7221263.9796.38812.811129.6571273.462997.2861.25758.48721.2552871.30767.111129.2213.155772.10110.6047.49327412.7610958.25248.09155245.24099298.1510.5521465.57226.8477181.290274298.1321.8101478.9071.5741261.6396.55512.811129.8051274.962997.1511.25658.44121.2662872.60567.630129.1213.447764.57527320.831458.771.295204285.5021.8221475.4771.64812.790129.6322999.99962.020OpenBenchmarking.org

CloverLeaf

CloverLeaf is a Lagrangian-Eulerian hydrodynamics benchmark. This test profile currently makes use of CloverLeaf's OpenMP version and benchmarked with the clover_bm.in input file (Problem 5). Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterCloverLeafLagrangian-Eulerian Hydrodynamics123306090120150SE +/- 0.44, N = 3SE +/- 0.20, N = 3SE +/- 0.24, N = 3125.73129.22129.121. (F9X) gfortran options: -O3 -march=native -funroll-loops -fopenmp
OpenBenchmarking.orgSeconds, Fewer Is BetterCloverLeafLagrangian-Eulerian Hydrodynamics12320406080100Min: 125.03 / Avg: 125.73 / Max: 126.53Min: 128.84 / Avg: 129.22 / Max: 129.54Min: 128.77 / Avg: 129.12 / Max: 129.571. (F9X) gfortran options: -O3 -march=native -funroll-loops -fopenmp

Dolfyn

Dolfyn is a Computational Fluid Dynamics (CFD) code of modern numerical simulation techniques. The Dolfyn test profile measures the execution time of the bundled computational fluid dynamics demos that are bundled with Dolfyn. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterDolfyn 0.527Computational Fluid Dynamics1233691215SE +/- 0.05, N = 3SE +/- 0.05, N = 3SE +/- 0.16, N = 313.4413.1613.45
OpenBenchmarking.orgSeconds, Fewer Is BetterDolfyn 0.527Computational Fluid Dynamics12348121620Min: 13.38 / Avg: 13.44 / Max: 13.54Min: 13.1 / Avg: 13.16 / Max: 13.25Min: 13.12 / Avg: 13.45 / Max: 13.66

CP2K Molecular Dynamics

CP2K is an open-source molecular dynamics software package focused on quantum chemistry and solid-state physics. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterCP2K Molecular Dynamics 8.1Fayalite-FIST Data1232004006008001000779.65772.10764.58

LAMMPS Molecular Dynamics Simulator

LAMMPS is a classical molecular dynamics code, and an acronym for Large-scale Atomic/Molecular Massively Parallel Simulator. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgns/day, More Is BetterLAMMPS Molecular Dynamics Simulator 29Oct2020Model: Rhodopsin Protein123691215SE +/- 0.07, N = 15SE +/- 0.12, N = 410.4310.601. (CXX) g++ options: -O3 -pthread -lm
OpenBenchmarking.orgns/day, More Is BetterLAMMPS Molecular Dynamics Simulator 29Oct2020Model: Rhodopsin Protein123691215Min: 10.02 / Avg: 10.43 / Max: 10.85Min: 10.31 / Avg: 10.6 / Max: 10.871. (CXX) g++ options: -O3 -pthread -lm

Timed MAFFT Alignment

This test performs an alignment of 100 pyruvate decarboxylase sequences. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 7.471Multiple Sequence Alignment - LSU RNA12246810SE +/- 0.062, N = 3SE +/- 0.024, N = 37.3797.4931. (CC) gcc options: -std=c99 -O3 -lm -lpthread
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 7.471Multiple Sequence Alignment - LSU RNA123691215Min: 7.27 / Avg: 7.38 / Max: 7.49Min: 7.47 / Avg: 7.49 / Max: 7.541. (CC) gcc options: -std=c99 -O3 -lm -lpthread

NAS Parallel Benchmarks

NPB, NAS Parallel Benchmarks, is a benchmark developed by NASA for high-end computer systems. This test profile currently uses the MPI version of NPB. This test profile offers selecting the different NPB tests/problems and varying problem sizes. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.4Test / Class: LU.C1236K12K18K24K30KSE +/- 51.45, N = 3SE +/- 29.40, N = 3SE +/- 40.05, N = 327079.4327412.7627320.831. (F9X) gfortran options: -O3 -march=native -pthread -lmpi_usempif08 -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -ldl -levent -levent_pthreads -lutil -lm -lrt -lz 2. Open MPI 4.0.3
OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.4Test / Class: LU.C1235K10K15K20K25KMin: 26977.86 / Avg: 27079.43 / Max: 27144.49Min: 27379.9 / Avg: 27412.76 / Max: 27471.42Min: 27259.88 / Avg: 27320.83 / Max: 27396.321. (F9X) gfortran options: -O3 -march=native -pthread -lmpi_usempif08 -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -ldl -levent -levent_pthreads -lutil -lm -lrt -lz 2. Open MPI 4.0.3

NWChem

NWChem is an open-source high performance computational chemistry package. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterNWChem 7.0Input: C240 Buckyball122K4K6K8K10K11086.010958.21. (F9X) gfortran options: -lnwctask -lccsd -lmcscf -lselci -lmp2 -lmoints -lstepper -ldriver -loptim -lnwdft -lgradients -lcphf -lesp -lddscf -ldangchang -lguess -lhessian -lvib -lnwcutil -lrimp2 -lproperty -lsolvation -lnwints -lprepar -lnwmd -lnwpw -lofpw -lpaw -lpspw -lband -lnwpwlib -lcafe -lspace -lanalyze -lqhop -lpfft -ldplot -ldrdy -lvscf -lqmmm -lqmd -letrans -ltce -lbq -lmm -lcons -lperfm -ldntmc -lccca -ldimqm -lga -larmci -lpeigs -l64to32 -lopenblas -lpthread -lrt -llapack -lnwcblas -lmpi_usempif08 -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -ldl -levent -levent_pthreads -lutil -lm -lz -lcomex -m64 -ffast-math -std=legacy -fdefault-integer-8 -finline-functions -O2

LULESH

LULESH is the Livermore Unstructured Lagrangian Explicit Shock Hydrodynamics. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgz/s, More Is BetterLULESH 2.0.31211002200330044005500SE +/- 39.49, N = 3SE +/- 25.04, N = 35197.435248.091. (CXX) g++ options: -O3 -fopenmp -lm -pthread -lmpi_cxx -lmpi
OpenBenchmarking.orgz/s, More Is BetterLULESH 2.0.3129001800270036004500Min: 5120.76 / Avg: 5197.43 / Max: 5252.19Min: 5222.51 / Avg: 5248.09 / Max: 5298.171. (CXX) g++ options: -O3 -fopenmp -lm -pthread -lmpi_cxx -lmpi

Himeno Benchmark

The Himeno benchmark is a linear solver of pressure Poisson using a point-Jacobi method. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgMFLOPS, More Is BetterHimeno Benchmark 3.0Poisson Pressure Solver1211002200330044005500SE +/- 79.28, N = 15SE +/- 75.41, N = 155210.615245.241. (CC) gcc options: -O3 -mavx2
OpenBenchmarking.orgMFLOPS, More Is BetterHimeno Benchmark 3.0Poisson Pressure Solver129001800270036004500Min: 4874.63 / Avg: 5210.61 / Max: 5859.36Min: 4733.38 / Avg: 5245.24 / Max: 5661.011. (CC) gcc options: -O3 -mavx2

OpenFOAM

OpenFOAM is the leading free, open source software for computational fluid dynamics (CFD). Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterOpenFOAM 8Input: Motorbike 30M1220406080100SE +/- 0.11, N = 3SE +/- 0.14, N = 397.5398.151. (CXX) g++ options: -std=c++11 -m64 -O3 -ftemplate-depth-100 -fPIC -fuse-ld=bfd -Xlinker --add-needed --no-as-needed -lfoamToVTK -ldynamicMesh -llagrangian -lgenericPatchFields -lfileFormats -lOpenFOAM -ldl -lm
OpenBenchmarking.orgSeconds, Fewer Is BetterOpenFOAM 8Input: Motorbike 30M1220406080100Min: 97.32 / Avg: 97.53 / Max: 97.67Min: 97.99 / Avg: 98.15 / Max: 98.431. (CXX) g++ options: -std=c++11 -m64 -O3 -ftemplate-depth-100 -fPIC -fuse-ld=bfd -Xlinker --add-needed --no-as-needed -lfoamToVTK -ldynamicMesh -llagrangian -lgenericPatchFields -lfileFormats -lOpenFOAM -ldl -lm

LAMMPS Molecular Dynamics Simulator

LAMMPS is a classical molecular dynamics code, and an acronym for Large-scale Atomic/Molecular Massively Parallel Simulator. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgns/day, More Is BetterLAMMPS Molecular Dynamics Simulator 29Oct2020Model: 20k Atoms123691215SE +/- 0.06, N = 3SE +/- 0.01, N = 310.6110.551. (CXX) g++ options: -O3 -pthread -lm
OpenBenchmarking.orgns/day, More Is BetterLAMMPS Molecular Dynamics Simulator 29Oct2020Model: 20k Atoms123691215Min: 10.51 / Avg: 10.61 / Max: 10.72Min: 10.54 / Avg: 10.55 / Max: 10.571. (CXX) g++ options: -O3 -pthread -lm

NAS Parallel Benchmarks

NPB, NAS Parallel Benchmarks, is a benchmark developed by NASA for high-end computer systems. This test profile currently uses the MPI version of NPB. This test profile offers selecting the different NPB tests/problems and varying problem sizes. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.4Test / Class: EP.D12330060090012001500SE +/- 4.03, N = 3SE +/- 3.58, N = 3SE +/- 10.15, N = 31460.311465.571458.771. (F9X) gfortran options: -O3 -march=native -pthread -lmpi_usempif08 -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -ldl -levent -levent_pthreads -lutil -lm -lrt -lz 2. Open MPI 4.0.3
OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.4Test / Class: EP.D12330060090012001500Min: 1453.55 / Avg: 1460.31 / Max: 1467.49Min: 1459.1 / Avg: 1465.57 / Max: 1471.45Min: 1438.93 / Avg: 1458.77 / Max: 1472.421. (F9X) gfortran options: -O3 -march=native -pthread -lmpi_usempif08 -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -ldl -levent -levent_pthreads -lutil -lm -lrt -lz 2. Open MPI 4.0.3

Incompact3D

Incompact3d is a Fortran-MPI based, finite difference high-performance code for solving the incompressible Navier-Stokes equation and as many as you need scalar transport equations. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterIncompact3D 2020-09-17Input: Cylinder1250100150200250SE +/- 2.70, N = 3SE +/- 2.49, N = 4227.76226.851. (F9X) gfortran options: -cpp -funroll-loops -floop-optimize -fcray-pointer -fbacktrace -pthread -lmpi_usempif08 -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -ldl -levent -levent_pthreads -lutil -lm -lrt -lz
OpenBenchmarking.orgSeconds, Fewer Is BetterIncompact3D 2020-09-17Input: Cylinder124080120160200Min: 224.83 / Avg: 227.76 / Max: 233.16Min: 222.25 / Avg: 226.85 / Max: 233.921. (F9X) gfortran options: -cpp -funroll-loops -floop-optimize -fcray-pointer -fbacktrace -pthread -lmpi_usempif08 -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -ldl -levent -levent_pthreads -lutil -lm -lrt -lz

NAMD

NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. NAMD was developed by the Theoretical and Computational Biophysics Group in the Beckman Institute for Advanced Science and Technology at the University of Illinois at Urbana-Champaign. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgdays/ns, Fewer Is BetterNAMD 2.14ATPase Simulation - 327,506 Atoms1230.29140.58280.87421.16561.457SE +/- 0.00369, N = 3SE +/- 0.00110, N = 3SE +/- 0.00373, N = 31.293981.290271.29520
OpenBenchmarking.orgdays/ns, Fewer Is BetterNAMD 2.14ATPase Simulation - 327,506 Atoms123246810Min: 1.29 / Avg: 1.29 / Max: 1.3Min: 1.29 / Avg: 1.29 / Max: 1.29Min: 1.29 / Avg: 1.3 / Max: 1.3

miniFE

MiniFE Finite Element is an application for unstructured implicit finite element codes. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgCG Mflops, More Is BetterminiFE 2.2Problem Size: Small1239001800270036004500SE +/- 11.60, N = 3SE +/- 0.62, N = 3SE +/- 11.25, N = 34290.684298.134285.501. (CXX) g++ options: -O3 -fopenmp -pthread -lmpi_cxx -lmpi
OpenBenchmarking.orgCG Mflops, More Is BetterminiFE 2.2Problem Size: Small1237001400210028003500Min: 4267.51 / Avg: 4290.68 / Max: 4303.3Min: 4297.08 / Avg: 4298.13 / Max: 4299.24Min: 4263.01 / Avg: 4285.5 / Max: 4297.361. (CXX) g++ options: -O3 -fopenmp -pthread -lmpi_cxx -lmpi

Rodinia

Rodinia is a suite focused upon accelerating compute-intensive applications with accelerators. CUDA, OpenMP, and OpenCL parallel models are supported by the included applications. This profile utilizes select OpenCL, NVIDIA CUDA and OpenMP test binaries at the moment. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterRodinia 3.1Test: OpenMP Streamcluster123510152025SE +/- 0.16, N = 3SE +/- 0.02, N = 3SE +/- 0.00, N = 321.8621.8121.821. (CXX) g++ options: -O2 -lOpenCL
OpenBenchmarking.orgSeconds, Fewer Is BetterRodinia 3.1Test: OpenMP Streamcluster123510152025Min: 21.69 / Avg: 21.86 / Max: 22.18Min: 21.78 / Avg: 21.81 / Max: 21.85Min: 21.82 / Avg: 21.82 / Max: 21.831. (CXX) g++ options: -O2 -lOpenCL

NAS Parallel Benchmarks

NPB, NAS Parallel Benchmarks, is a benchmark developed by NASA for high-end computer systems. This test profile currently uses the MPI version of NPB. This test profile offers selecting the different NPB tests/problems and varying problem sizes. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.4Test / Class: EP.C12330060090012001500SE +/- 2.77, N = 3SE +/- 3.50, N = 3SE +/- 3.14, N = 31477.461478.901475.471. (F9X) gfortran options: -O3 -march=native -pthread -lmpi_usempif08 -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -ldl -levent -levent_pthreads -lutil -lm -lrt -lz 2. Open MPI 4.0.3
OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.4Test / Class: EP.C12330060090012001500Min: 1473.23 / Avg: 1477.46 / Max: 1482.68Min: 1472.73 / Avg: 1478.9 / Max: 1484.84Min: 1470.8 / Avg: 1475.47 / Max: 1481.441. (F9X) gfortran options: -O3 -march=native -pthread -lmpi_usempif08 -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -ldl -levent -levent_pthreads -lutil -lm -lrt -lz 2. Open MPI 4.0.3

Rodinia

Rodinia is a suite focused upon accelerating compute-intensive applications with accelerators. CUDA, OpenMP, and OpenCL parallel models are supported by the included applications. This profile utilizes select OpenCL, NVIDIA CUDA and OpenMP test binaries at the moment. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterRodinia 3.1Test: OpenMP Leukocyte1231632486480SE +/- 0.32, N = 3SE +/- 0.20, N = 3SE +/- 0.29, N = 371.7271.5771.651. (CXX) g++ options: -O2 -lOpenCL
OpenBenchmarking.orgSeconds, Fewer Is BetterRodinia 3.1Test: OpenMP Leukocyte1231428425670Min: 71.12 / Avg: 71.72 / Max: 72.22Min: 71.19 / Avg: 71.57 / Max: 71.83Min: 71.14 / Avg: 71.65 / Max: 72.121. (CXX) g++ options: -O2 -lOpenCL

Quantum ESPRESSO

Quantum ESPRESSO is an integrated suite of Open-Source computer codes for electronic-structure calculations and materials modeling at the nanoscale. It is based on density-functional theory, plane waves, and pseudopotentials. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterQuantum ESPRESSO 6.7Input: AUSURF1121230060090012001500SE +/- 1.65, N = 3SE +/- 2.61, N = 31263.971261.631. (F9X) gfortran options: -lopenblas -lFoX_dom -lFoX_sax -lFoX_wxml -lFoX_common -lFoX_utils -lFoX_fsys -lfftw3 -pthread -lmpi_usempif08 -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -ldl -levent -levent_pthreads -lutil -lm -lrt -lz
OpenBenchmarking.orgSeconds, Fewer Is BetterQuantum ESPRESSO 6.7Input: AUSURF112122004006008001000Min: 1260.92 / Avg: 1263.97 / Max: 1266.58Min: 1256.42 / Avg: 1261.63 / Max: 1264.571. (F9X) gfortran options: -lopenblas -lFoX_dom -lFoX_sax -lFoX_wxml -lFoX_common -lFoX_utils -lFoX_fsys -lfftw3 -pthread -lmpi_usempif08 -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -ldl -levent -levent_pthreads -lutil -lm -lrt -lz

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 3.3.1Pfam Database Search1220406080100SE +/- 0.11, N = 3SE +/- 0.07, N = 396.3996.561. (CC) gcc options: -O3 -pthread -lhmmer -leasel -lm
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 3.3.1Pfam Database Search1220406080100Min: 96.23 / Avg: 96.39 / Max: 96.61Min: 96.43 / Avg: 96.56 / Max: 96.661. (CC) gcc options: -O3 -pthread -lhmmer -leasel -lm

Rodinia

Rodinia is a suite focused upon accelerating compute-intensive applications with accelerators. CUDA, OpenMP, and OpenCL parallel models are supported by the included applications. This profile utilizes select OpenCL, NVIDIA CUDA and OpenMP test binaries at the moment. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterRodinia 3.1Test: OpenMP CFD Solver1233691215SE +/- 0.03, N = 3SE +/- 0.03, N = 3SE +/- 0.03, N = 312.8112.8112.791. (CXX) g++ options: -O2 -lOpenCL
OpenBenchmarking.orgSeconds, Fewer Is BetterRodinia 3.1Test: OpenMP CFD Solver12348121620Min: 12.76 / Avg: 12.81 / Max: 12.85Min: 12.78 / Avg: 12.81 / Max: 12.87Min: 12.73 / Avg: 12.79 / Max: 12.851. (CXX) g++ options: -O2 -lOpenCL

OpenBenchmarking.orgSeconds, Fewer Is BetterRodinia 3.1Test: OpenMP LavaMD123306090120150SE +/- 0.13, N = 3SE +/- 0.06, N = 3SE +/- 0.05, N = 3129.66129.81129.631. (CXX) g++ options: -O2 -lOpenCL
OpenBenchmarking.orgSeconds, Fewer Is BetterRodinia 3.1Test: OpenMP LavaMD12320406080100Min: 129.4 / Avg: 129.66 / Max: 129.82Min: 129.68 / Avg: 129.8 / Max: 129.89Min: 129.55 / Avg: 129.63 / Max: 129.711. (CXX) g++ options: -O2 -lOpenCL

OpenFOAM

OpenFOAM is the leading free, open source software for computational fluid dynamics (CFD). Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterOpenFOAM 8Input: Motorbike 60M1230060090012001500SE +/- 0.39, N = 3SE +/- 0.48, N = 31273.461274.961. (CXX) g++ options: -std=c++11 -m64 -O3 -ftemplate-depth-100 -fPIC -fuse-ld=bfd -Xlinker --add-needed --no-as-needed -lfoamToVTK -ldynamicMesh -llagrangian -lgenericPatchFields -lfileFormats -lOpenFOAM -ldl -lm
OpenBenchmarking.orgSeconds, Fewer Is BetterOpenFOAM 8Input: Motorbike 60M122004006008001000Min: 1272.78 / Avg: 1273.46 / Max: 1274.14Min: 1274.01 / Avg: 1274.96 / Max: 1275.451. (CXX) g++ options: -std=c++11 -m64 -O3 -ftemplate-depth-100 -fPIC -fuse-ld=bfd -Xlinker --add-needed --no-as-needed -lfoamToVTK -ldynamicMesh -llagrangian -lgenericPatchFields -lfileFormats -lOpenFOAM -ldl -lm

Pennant

Pennant is an application focused on hydrodynamics on general unstructured meshes in 2D. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgHydro Cycle Time - Seconds, Fewer Is BetterPennant 1.0.1Test: sedovbig1236001200180024003000SE +/- 0.38, N = 3SE +/- 0.44, N = 3SE +/- 0.58, N = 32997.292997.153000.001. (CXX) g++ options: -fopenmp -pthread -lmpi_cxx -lmpi
OpenBenchmarking.orgHydro Cycle Time - Seconds, Fewer Is BetterPennant 1.0.1Test: sedovbig1235001000150020002500Min: 2996.59 / Avg: 2997.29 / Max: 2997.9Min: 2996.28 / Avg: 2997.15 / Max: 2997.68Min: 2998.91 / Avg: 3000 / Max: 3000.861. (CXX) g++ options: -fopenmp -pthread -lmpi_cxx -lmpi

GROMACS

The GROMACS (GROningen MAchine for Chemical Simulations) molecular dynamics package testing on the CPU with the water_GMX50 data. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgNs Per Day, More Is BetterGROMACS 2020.3Water Benchmark120.28280.56560.84841.13121.414SE +/- 0.000, N = 3SE +/- 0.002, N = 31.2571.2561. (CXX) g++ options: -O3 -pthread -lrt -lpthread -lm
OpenBenchmarking.orgNs Per Day, More Is BetterGROMACS 2020.3Water Benchmark12246810Min: 1.26 / Avg: 1.26 / Max: 1.26Min: 1.25 / Avg: 1.26 / Max: 1.261. (CXX) g++ options: -O3 -pthread -lrt -lpthread -lm

Timed MrBayes Analysis

This test performs a bayesian analysis of a set of primate genome sequences in order to estimate their phylogeny. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MrBayes Analysis 3.2.7Primate Phylogeny Analysis121326395265SE +/- 0.12, N = 3SE +/- 0.15, N = 358.4958.441. (CC) gcc options: -mmmx -msse -msse2 -msse3 -mssse3 -msse4.1 -msse4.2 -msse4a -msha -maes -mavx -mfma -mavx2 -mrdrnd -mbmi -mbmi2 -madx -mabm -O3 -std=c99 -pedantic -lm
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MrBayes Analysis 3.2.7Primate Phylogeny Analysis121224364860Min: 58.31 / Avg: 58.49 / Max: 58.72Min: 58.15 / Avg: 58.44 / Max: 58.591. (CC) gcc options: -mmmx -msse -msse2 -msse3 -mssse3 -msse4.1 -msse4.2 -msse4a -msha -maes -mavx -mfma -mavx2 -mrdrnd -mbmi -mbmi2 -madx -mabm -O3 -std=c99 -pedantic -lm

QMCPACK

QMCPACK is a modern high-performance open-source Quantum Monte Carlo (QMC) simulation code making use of MPI for this benchmark of the H20 example code. QMCPACK is an open-source production level many-body ab initio Quantum Monte Carlo code for computing the electronic structure of atoms, molecules, and solids. QMCPACK is supported by the U.S. Department of Energy. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgTotal Execution Time - Seconds, Fewer Is BetterQMCPACK 3.10Input: simple-H2O12510152025SE +/- 0.17, N = 3SE +/- 0.12, N = 321.2621.271. (CXX) g++ options: -fopenmp -finline-limit=1000 -fstrict-aliasing -funroll-all-loops -march=native -O3 -fomit-frame-pointer -ffast-math -pthread -lm
OpenBenchmarking.orgTotal Execution Time - Seconds, Fewer Is BetterQMCPACK 3.10Input: simple-H2O12510152025Min: 20.92 / Avg: 21.25 / Max: 21.46Min: 21.09 / Avg: 21.27 / Max: 21.51. (CXX) g++ options: -fopenmp -finline-limit=1000 -fstrict-aliasing -funroll-all-loops -march=native -O3 -fomit-frame-pointer -ffast-math -pthread -lm

Pennant

Pennant is an application focused on hydrodynamics on general unstructured meshes in 2D. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgHydro Cycle Time - Seconds, Fewer Is BetterPennant 1.0.1Test: leblancbig126001200180024003000SE +/- 0.47, N = 3SE +/- 0.51, N = 32871.312872.611. (CXX) g++ options: -fopenmp -pthread -lmpi_cxx -lmpi
OpenBenchmarking.orgHydro Cycle Time - Seconds, Fewer Is BetterPennant 1.0.1Test: leblancbig125001000150020002500Min: 2870.48 / Avg: 2871.31 / Max: 2872.1Min: 2871.65 / Avg: 2872.61 / Max: 2873.361. (CXX) g++ options: -fopenmp -pthread -lmpi_cxx -lmpi

Rodinia

Rodinia is a suite focused upon accelerating compute-intensive applications with accelerators. CUDA, OpenMP, and OpenCL parallel models are supported by the included applications. This profile utilizes select OpenCL, NVIDIA CUDA and OpenMP test binaries at the moment. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterRodinia 3.1Test: OpenMP HotSpot3D1231530456075SE +/- 1.56, N = 15SE +/- 1.15, N = 15SE +/- 0.35, N = 367.1167.6362.021. (CXX) g++ options: -O2 -lOpenCL
OpenBenchmarking.orgSeconds, Fewer Is BetterRodinia 3.1Test: OpenMP HotSpot3D1231326395265Min: 62.17 / Avg: 67.11 / Max: 86.02Min: 61.49 / Avg: 67.63 / Max: 72.57Min: 61.57 / Avg: 62.02 / Max: 62.71. (CXX) g++ options: -O2 -lOpenCL