os bench

VMware testing on Ubuntu 18.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2101188-HYDR-210111905
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Debian PVE kernel
January 10
  6 Hours, 15 Minutes
ubuntu 18.04 + kernel 4.15.0-130
January 17
  8 Hours, 32 Minutes
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  7 Hours, 23 Minutes
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os benchProcessorMotherboardChipsetMemoryDiskGraphicsNetworkOSKernelCompilerFile-SystemScreen ResolutionSystem LayerDebian PVE kernelubuntu 18.04 + kernel 4.15.0-1302 x Intel Celeron J3455 (3 Cores)Intel 440BX (6.00 BIOS)Intel 440BX/ZX/DX4096MB34GB Virtual diskVMware SVGA IIVMware VMXNET3Debian 105.4.78-2-pve (x86_64)GCC 8.3.0ext41176x885VMwareUbuntu 18.044.15.0-130-generic (x86_64)GCC 7.5.0OpenBenchmarking.orgCompiler Details- --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-bootstrap --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++ --enable-libmpx --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib --with-tune=generic --without-cuda-driver -v Processor Details- CPU Microcode: 0x32Python Details- Debian PVE kernel: Python 2.7.16 + Python 3.7.3Security Details- Debian PVE kernel: itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Mitigation of PTI + spec_store_bypass: Vulnerable + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full generic retpoline IBPB: conditional IBRS_FW STIBP: disabled RSB filling + srbds: Not affected + tsx_async_abort: Not affected - ubuntu 18.04 + kernel 4.15.0-130: itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Vulnerable + spec_store_bypass: Vulnerable + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Vulnerable IBPB: disabled STIBP: disabled + srbds: Not affected + tsx_async_abort: Not affected

Debian PVE kernel vs. ubuntu 18.04 + kernel 4.15.0-130 ComparisonPhoronix Test Suite 10.4.0m1Baseline+3.3%+3.3%+6.6%+6.6%+9.9%+9.9%+13.2%+13.2%13.3%13.2%13.2%10.2%10.2%3.8%3.4%2.7%2.6%Stock - 2D FFT Size 32Stock - 1D FFT Size 32Stock - 1D FFT Size 4096S.F.P.RFloat + SSE - 2D FFT Size 32Float + SSE - 1D FFT Size 4096Stock - 2D FFT Size 4096Float + SSE - 1D FFT Size 32FFTWLULESHFFTWFFTWACES DGEMMFFTWFFTWFFTWFFTWDebian PVE kernelubuntu 18.04 + kernel 4.15.0-130

os benchcloverleaf: Lagrangian-Eulerian Hydrodynamicscp2k: Fayalite-FIST Datanamd: ATPase Simulation - 327,506 Atomsdolfyn: Computational Fluid Dynamicsfftw: Stock - 1D FFT Size 32fftw: Stock - 2D FFT Size 32fftw: Stock - 1D FFT Size 4096fftw: Stock - 2D FFT Size 4096fftw: Float + SSE - 1D FFT Size 32fftw: Float + SSE - 2D FFT Size 32fftw: Float + SSE - 1D FFT Size 4096fftw: Float + SSE - 2D FFT Size 4096hmmer: Pfam Database Searchlulesh: arrayfire: BLAS CPUmt-dgemm: Sustained Floating-Point Ratehimeno: Poisson Pressure SolverDebian PVE kernelubuntu 18.04 + kernel 4.15.0-13029.142170.13937.2122385.6692701.92805.72018.51477.73817.97452.06330.33160.2352.745246.7250122.28000.0730051200.07526829.092168.30637.5527385.1713057.33178.32224.31517.23916.67734.36543.13125.2354.250279.3031022.34310.0804191213.102085OpenBenchmarking.org

CloverLeaf

CloverLeaf is a Lagrangian-Eulerian hydrodynamics benchmark. This test profile currently makes use of CloverLeaf's OpenMP version and benchmarked with the clover_bm8192.in input file. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterCloverLeafLagrangian-Eulerian Hydrodynamicsubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel714212835SE +/- 0.20, N = 13SE +/- 0.05, N = 329.0929.141. (F9X) gfortran options: -O3 -march=native -funroll-loops -fopenmp
OpenBenchmarking.orgSeconds, Fewer Is BetterCloverLeafLagrangian-Eulerian Hydrodynamicsubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel612182430Min: 28.17 / Avg: 29.09 / Max: 30.94Min: 29.05 / Avg: 29.14 / Max: 29.211. (F9X) gfortran options: -O3 -march=native -funroll-loops -fopenmp

CP2K Molecular Dynamics

CP2K is an open-source molecular dynamics software package focused on quantum chemistry and solid-state physics. This test profile currently makes use of the OpenMP implementation and using the Fayalite-FIST molecular dynamics run and measures the total time to complete. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterCP2K Molecular Dynamics 6.1Fayalite-FIST Dataubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel50010001500200025002168.312170.14

NAMD

NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. NAMD was developed by the Theoretical and Computational Biophysics Group in the Beckman Institute for Advanced Science and Technology at the University of Illinois at Urbana-Champaign. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgdays/ns, Fewer Is BetterNAMD 2.14ATPase Simulation - 327,506 Atomsubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel918273645SE +/- 0.41, N = 3SE +/- 0.06, N = 337.5537.21
OpenBenchmarking.orgdays/ns, Fewer Is BetterNAMD 2.14ATPase Simulation - 327,506 Atomsubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel816243240Min: 37.05 / Avg: 37.55 / Max: 38.35Min: 37.1 / Avg: 37.21 / Max: 37.32

Dolfyn

Dolfyn is a Computational Fluid Dynamics (CFD) code of modern numerical simulation techniques. The Dolfyn test profile measures the execution time of the bundled computational fluid dynamics demos that are bundled with Dolfyn. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterDolfyn 0.527Computational Fluid Dynamicsubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel20406080100SE +/- 0.17, N = 3SE +/- 0.44, N = 385.1785.67
OpenBenchmarking.orgSeconds, Fewer Is BetterDolfyn 0.527Computational Fluid Dynamicsubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel1632486480Min: 84.83 / Avg: 85.17 / Max: 85.36Min: 84.81 / Avg: 85.67 / Max: 86.26

FFTW

FFTW is a C subroutine library for computing the discrete Fourier transform (DFT) in one or more dimensions. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgMflops, More Is BetterFFTW 3.3.6Build: Stock - Size: 1D FFT Size 32ubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel7001400210028003500SE +/- 6.62, N = 3SE +/- 28.02, N = 33057.32701.91. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm
OpenBenchmarking.orgMflops, More Is BetterFFTW 3.3.6Build: Stock - Size: 1D FFT Size 32ubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel5001000150020002500Min: 3050.5 / Avg: 3057.27 / Max: 3070.5Min: 2645.9 / Avg: 2701.93 / Max: 2730.51. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm

OpenBenchmarking.orgMflops, More Is BetterFFTW 3.3.6Build: Stock - Size: 2D FFT Size 32ubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel7001400210028003500SE +/- 16.23, N = 3SE +/- 3.95, N = 33178.32805.71. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm
OpenBenchmarking.orgMflops, More Is BetterFFTW 3.3.6Build: Stock - Size: 2D FFT Size 32ubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel6001200180024003000Min: 3146.8 / Avg: 3178.33 / Max: 3200.8Min: 2797.8 / Avg: 2805.7 / Max: 2809.81. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm

OpenBenchmarking.orgMflops, More Is BetterFFTW 3.3.6Build: Stock - Size: 1D FFT Size 4096ubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel5001000150020002500SE +/- 1.87, N = 3SE +/- 2.99, N = 32224.32018.51. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm
OpenBenchmarking.orgMflops, More Is BetterFFTW 3.3.6Build: Stock - Size: 1D FFT Size 4096ubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel400800120016002000Min: 2220.8 / Avg: 2224.3 / Max: 2227.2Min: 2012.5 / Avg: 2018.47 / Max: 2021.91. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm

OpenBenchmarking.orgMflops, More Is BetterFFTW 3.3.6Build: Stock - Size: 2D FFT Size 4096ubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel30060090012001500SE +/- 6.20, N = 3SE +/- 1.80, N = 31517.21477.71. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm
OpenBenchmarking.orgMflops, More Is BetterFFTW 3.3.6Build: Stock - Size: 2D FFT Size 4096ubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel30060090012001500Min: 1505.9 / Avg: 1517.17 / Max: 1527.3Min: 1474.1 / Avg: 1477.7 / Max: 1479.51. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm

OpenBenchmarking.orgMflops, More Is BetterFFTW 3.3.6Build: Float + SSE - Size: 1D FFT Size 32ubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel8001600240032004000SE +/- 31.50, N = 3SE +/- 10.18, N = 33916.63817.91. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm
OpenBenchmarking.orgMflops, More Is BetterFFTW 3.3.6Build: Float + SSE - Size: 1D FFT Size 32ubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel7001400210028003500Min: 3853.6 / Avg: 3916.6 / Max: 3948.8Min: 3805.8 / Avg: 3817.87 / Max: 3838.11. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm

OpenBenchmarking.orgMflops, More Is BetterFFTW 3.3.6Build: Float + SSE - Size: 2D FFT Size 32ubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel17003400510068008500SE +/- 33.23, N = 3SE +/- 42.40, N = 37734.37452.01. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm
OpenBenchmarking.orgMflops, More Is BetterFFTW 3.3.6Build: Float + SSE - Size: 2D FFT Size 32ubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel13002600390052006500Min: 7667.8 / Avg: 7734.27 / Max: 7767.8Min: 7376 / Avg: 7451.97 / Max: 7522.61. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm

OpenBenchmarking.orgMflops, More Is BetterFFTW 3.3.6Build: Float + SSE - Size: 1D FFT Size 4096ubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel14002800420056007000SE +/- 12.13, N = 3SE +/- 21.22, N = 36543.16330.31. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm
OpenBenchmarking.orgMflops, More Is BetterFFTW 3.3.6Build: Float + SSE - Size: 1D FFT Size 4096ubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel11002200330044005500Min: 6519.3 / Avg: 6543.1 / Max: 6559.1Min: 6294 / Avg: 6330.3 / Max: 6367.51. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm

OpenBenchmarking.orgMflops, More Is BetterFFTW 3.3.6Build: Float + SSE - Size: 2D FFT Size 4096ubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel7001400210028003500SE +/- 32.07, N = 9SE +/- 34.09, N = 43125.23160.21. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm
OpenBenchmarking.orgMflops, More Is BetterFFTW 3.3.6Build: Float + SSE - Size: 2D FFT Size 4096ubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel5001000150020002500Min: 2924.7 / Avg: 3125.22 / Max: 3258.8Min: 3073.7 / Avg: 3160.18 / Max: 3239.21. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 3.3.1Pfam Database Searchubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel80160240320400SE +/- 0.24, N = 3SE +/- 0.56, N = 3354.25352.751. (CC) gcc options: -O3 -pthread -lhmmer -leasel -lm
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 3.3.1Pfam Database Searchubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel60120180240300Min: 353.97 / Avg: 354.25 / Max: 354.72Min: 352.03 / Avg: 352.75 / Max: 353.841. (CC) gcc options: -O3 -pthread -lhmmer -leasel -lm

LULESH

LULESH is the Livermore Unstructured Lagrangian Explicit Shock Hydrodynamics. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgz/s, More Is BetterLULESH 2.0.3ubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel60120180240300SE +/- 2.78, N = 5SE +/- 2.37, N = 3279.30246.731. (CXX) g++ options: -O3 -fopenmp -lm -pthread -lmpi_cxx -lmpi
OpenBenchmarking.orgz/s, More Is BetterLULESH 2.0.3ubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel50100150200250Min: 268.9 / Avg: 279.3 / Max: 285.38Min: 242.02 / Avg: 246.73 / Max: 249.511. (CXX) g++ options: -O3 -fopenmp -lm -pthread -lmpi_cxx -lmpi

ArrayFire

ArrayFire is an GPU and CPU numeric processing library, this test uses the built-in CPU and OpenCL ArrayFire benchmarks. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgGFLOPS, More Is BetterArrayFire 3.7Test: BLAS CPUubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel510152025SE +/- 0.25, N = 3SE +/- 0.23, N = 322.3422.281. (CXX) g++ options: -rdynamic
OpenBenchmarking.orgGFLOPS, More Is BetterArrayFire 3.7Test: BLAS CPUubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel510152025Min: 21.83 / Avg: 22.34 / Max: 22.62Min: 22.05 / Avg: 22.28 / Max: 22.741. (CXX) g++ options: -rdynamic

ACES DGEMM

This is a multi-threaded DGEMM benchmark. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgGFLOP/s, More Is BetterACES DGEMM 1.0Sustained Floating-Point Rateubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel0.01810.03620.05430.07240.0905SE +/- 0.000860, N = 5SE +/- 0.000566, N = 30.0804190.0730051. (CC) gcc options: -O3 -march=native -fopenmp
OpenBenchmarking.orgGFLOP/s, More Is BetterACES DGEMM 1.0Sustained Floating-Point Rateubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel12345Min: 0.08 / Avg: 0.08 / Max: 0.08Min: 0.07 / Avg: 0.07 / Max: 0.071. (CC) gcc options: -O3 -march=native -fopenmp

Himeno Benchmark

The Himeno benchmark is a linear solver of pressure Poisson using a point-Jacobi method. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgMFLOPS, More Is BetterHimeno Benchmark 3.0Poisson Pressure Solverubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel30060090012001500SE +/- 4.08, N = 3SE +/- 1.17, N = 31213.101200.081. (CC) gcc options: -O3
OpenBenchmarking.orgMFLOPS, More Is BetterHimeno Benchmark 3.0Poisson Pressure Solverubuntu 18.04 + kernel 4.15.0-130Debian PVE kernel2004006008001000Min: 1204.94 / Avg: 1213.1 / Max: 1217.37Min: 1198.35 / Avg: 1200.08 / Max: 1202.31. (CC) gcc options: -O3