namd1800xbench

AMD Ryzen 7 1800X Eight-Core testing with a ASUS ROG STRIX X470-F GAMING (5603 BIOS) and NVIDIA GeForce RTX 2060 6GB on Ubuntu 20.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2101159-HA-NAMD1800X74
Jump To Table - Results

Statistics

Remove Outliers Before Calculating Averages

Graph Settings

Prefer Vertical Bar Graphs

Table

Show Detailed System Result Table

Run Management

Result
Identifier
View Logs
Performance Per
Dollar
Date
Run
  Test
  Duration
1800x
January 15 2021
  7 Minutes

1800x

Processor: AMD Ryzen 7 1800X Eight-Core @ 3.60GHz (8 Cores / 16 Threads), Motherboard: ASUS ROG STRIX X470-F GAMING (5603 BIOS), Chipset: AMD 17h, Memory: 32GB, Disk: 2 x HP SSD EX950 512GB + 1000GB Western Digital WD10EFRX-68F + 1000GB Western Digital WD10JPCX-24U + 4001GB Seagate ST4000DM004-2CV1 + 16GB Cruzer Blade, Graphics: NVIDIA GeForce RTX 2060 6GB (1365/7000MHz), Audio: NVIDIA TU106 HD Audio, Monitor: FG276, Network: Intel I211

OS: Ubuntu 20.04, Kernel: 5.8.0-38-generic (x86_64), Desktop: GNOME Shell 3.36.4, Display Server: X Server 1.20.9, Display Driver: NVIDIA 455.32.00, OpenGL: 4.6.0, Vulkan: 1.2.142, Compiler: GCC 9.3.0 + CUDA 11.1, File-System: ext4, Screen Resolution: 2560x1440

Processor Notes: Scaling Governor: acpi-cpufreq ondemand (Boost: Enabled) - CPU Microcode: 0x8001138
Security Notes: itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional STIBP: disabled RSB filling + srbds: Not affected + tsx_async_abort: Not affected

namd1800xbenchOpenBenchmarking.orgPhoronix Test SuiteAMD Ryzen 7 1800X Eight-Core @ 3.60GHz (8 Cores / 16 Threads)ASUS ROG STRIX X470-F GAMING (5603 BIOS)AMD 17h32GB2 x HP SSD EX950 512GB + 1000GB Western Digital WD10EFRX-68F + 1000GB Western Digital WD10JPCX-24U + 4001GB Seagate ST4000DM004-2CV1 + 16GB Cruzer BladeNVIDIA GeForce RTX 2060 6GB (1365/7000MHz)NVIDIA TU106 HD AudioFG276Intel I211Ubuntu 20.045.8.0-38-generic (x86_64)GNOME Shell 3.36.4X Server 1.20.9NVIDIA 455.32.004.6.01.2.142GCC 9.3.0 + CUDA 11.1ext42560x1440ProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay ServerDisplay DriverOpenGLVulkanCompilerFile-SystemScreen ResolutionNamd1800xbench BenchmarksSystem Logs- Scaling Governor: acpi-cpufreq ondemand (Boost: Enabled) - CPU Microcode: 0x8001138- itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional STIBP: disabled RSB filling + srbds: Not affected + tsx_async_abort: Not affected

NAMD

NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. NAMD was developed by the Theoretical and Computational Biophysics Group in the Beckman Institute for Advanced Science and Technology at the University of Illinois at Urbana-Champaign. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgdays/ns, Fewer Is BetterNAMD 2.14ATPase Simulation - 327,506 Atoms1800x0.59671.19341.79012.38682.9835SE +/- 0.00226, N = 32.65196

1800x

Processor: AMD Ryzen 7 1800X Eight-Core @ 3.60GHz (8 Cores / 16 Threads), Motherboard: ASUS ROG STRIX X470-F GAMING (5603 BIOS), Chipset: AMD 17h, Memory: 32GB, Disk: 2 x HP SSD EX950 512GB + 1000GB Western Digital WD10EFRX-68F + 1000GB Western Digital WD10JPCX-24U + 4001GB Seagate ST4000DM004-2CV1 + 16GB Cruzer Blade, Graphics: NVIDIA GeForce RTX 2060 6GB (1365/7000MHz), Audio: NVIDIA TU106 HD Audio, Monitor: FG276, Network: Intel I211

OS: Ubuntu 20.04, Kernel: 5.8.0-38-generic (x86_64), Desktop: GNOME Shell 3.36.4, Display Server: X Server 1.20.9, Display Driver: NVIDIA 455.32.00, OpenGL: 4.6.0, Vulkan: 1.2.142, Compiler: GCC 9.3.0 + CUDA 11.1, File-System: ext4, Screen Resolution: 2560x1440

Processor Notes: Scaling Governor: acpi-cpufreq ondemand (Boost: Enabled) - CPU Microcode: 0x8001138
Security Notes: itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional STIBP: disabled RSB filling + srbds: Not affected + tsx_async_abort: Not affected

Testing initiated at 15 January 2021 21:34 by user pedro.