3900X nn

AMD Ryzen 9 3900X 12-Core testing with a ASUS TUF GAMING X570-PLUS (WI-FI) (2203 BIOS) and MSI AMD Radeon RX 470/480/570/570X/580/580X/590 8GB on Ubuntu 20.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2101149-HA-3900XNN6723
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January 13 2021
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3900X nnProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay ServerDisplay DriverOpenGLVulkanCompilerFile-SystemScreen Resolution123AMD Ryzen 9 3900X 12-Core @ 3.80GHz (12 Cores / 24 Threads)ASUS TUF GAMING X570-PLUS (WI-FI) (2203 BIOS)AMD Starship/Matisse16GBSamsung SSD 970 EVO Plus 250GBMSI AMD Radeon RX 470/480/570/570X/580/580X/590 8GB (1366/2000MHz)AMD Ellesmere HDMI AudioLG Ultra HDRealtek RTL8111/8168/8411 + Intel-AC 9260Ubuntu 20.045.11.0-rc1-phx (x86_64) 20201228GNOME Shell 3.36.4X Server 1.20.8modesetting 1.20.84.6 Mesa 21.0.0-devel (git-28a202f 2020-12-31 focal-oibaf-ppa) (LLVM 11.0.0)1.2.145GCC 9.3.0ext41920x1080OpenBenchmarking.orgCompiler Details- --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,gm2 --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=/build/gcc-9-HskZEa/gcc-9-9.3.0/debian/tmp-nvptx/usr,hsa --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v Processor Details- Scaling Governor: acpi-cpufreq ondemand (Boost: Enabled) - CPU Microcode: 0x8701021Security Details- itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional STIBP: conditional RSB filling + srbds: Not affected + tsx_async_abort: Not affected

123Result OverviewPhoronix Test Suite100%100%101%101%101%rav1eQuantum ESPRESSOMobile Neural NetworkLAMMPS Molecular Dynamics SimulatorRELION

3900X nnqe: AUSURF112relion: Basic - CPUlammps: 20k Atomslammps: Rhodopsin Proteinrav1e: 1rav1e: 5rav1e: 6rav1e: 10mnn: SqueezeNetV1.0mnn: resnet-v2-50mnn: MobileNetV2_224mnn: mobilenet-v1-1.0mnn: inception-v31231252.272212.8358.2618.1730.4321.2521.6743.6377.14933.4854.5874.51434.9281241.032215.7218.2428.1880.4231.2371.6593.6007.01232.6874.6204.46534.7641244.572219.6678.2178.1450.4261.2451.6583.6187.00333.2454.6324.48534.967OpenBenchmarking.org

Quantum ESPRESSO

Quantum ESPRESSO is an integrated suite of Open-Source computer codes for electronic-structure calculations and materials modeling at the nanoscale. It is based on density-functional theory, plane waves, and pseudopotentials. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterQuantum ESPRESSO 6.7Input: AUSURF11232130060090012001500SE +/- 9.02, N = 3SE +/- 16.20, N = 3SE +/- 10.16, N = 31244.571241.031252.271. (F9X) gfortran options: -lopenblas -lFoX_dom -lFoX_sax -lFoX_wxml -lFoX_common -lFoX_utils -lFoX_fsys -lfftw3 -pthread -lmpi_usempif08 -lmpi_mpifh -lmpi
OpenBenchmarking.orgSeconds, Fewer Is BetterQuantum ESPRESSO 6.7Input: AUSURF1123212004006008001000Min: 1226.67 / Avg: 1244.57 / Max: 1255.49Min: 1211.19 / Avg: 1241.03 / Max: 1266.89Min: 1232.96 / Avg: 1252.27 / Max: 1267.431. (F9X) gfortran options: -lopenblas -lFoX_dom -lFoX_sax -lFoX_wxml -lFoX_common -lFoX_utils -lFoX_fsys -lfftw3 -pthread -lmpi_usempif08 -lmpi_mpifh -lmpi

RELION

RELION - REgularised LIkelihood OptimisatioN - is a stand-alone computer program for Maximum A Posteriori refinement of (multiple) 3D reconstructions or 2D class averages in cryo-electron microscopy (cryo-EM). It is developed in the research group of Sjors Scheres at the MRC Laboratory of Molecular Biology. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterRELION 3.1.1Test: Basic - Device: CPU3215001000150020002500SE +/- 4.34, N = 3SE +/- 2.58, N = 3SE +/- 4.50, N = 32219.672215.722212.841. (CXX) g++ options: -fopenmp -std=c++0x -O3 -rdynamic -ldl -ltiff -lfftw3f -lfftw3 -lpng -pthread -lmpi_cxx -lmpi
OpenBenchmarking.orgSeconds, Fewer Is BetterRELION 3.1.1Test: Basic - Device: CPU321400800120016002000Min: 2212.91 / Avg: 2219.67 / Max: 2227.78Min: 2212.52 / Avg: 2215.72 / Max: 2220.83Min: 2204.88 / Avg: 2212.84 / Max: 2220.461. (CXX) g++ options: -fopenmp -std=c++0x -O3 -rdynamic -ldl -ltiff -lfftw3f -lfftw3 -lpng -pthread -lmpi_cxx -lmpi

LAMMPS Molecular Dynamics Simulator

LAMMPS is a classical molecular dynamics code, and an acronym for Large-scale Atomic/Molecular Massively Parallel Simulator. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgns/day, More Is BetterLAMMPS Molecular Dynamics Simulator 29Oct2020Model: 20k Atoms321246810SE +/- 0.015, N = 3SE +/- 0.022, N = 3SE +/- 0.008, N = 38.2178.2428.2611. (CXX) g++ options: -O3 -pthread -lm
OpenBenchmarking.orgns/day, More Is BetterLAMMPS Molecular Dynamics Simulator 29Oct2020Model: 20k Atoms3213691215Min: 8.19 / Avg: 8.22 / Max: 8.24Min: 8.2 / Avg: 8.24 / Max: 8.27Min: 8.25 / Avg: 8.26 / Max: 8.281. (CXX) g++ options: -O3 -pthread -lm

OpenBenchmarking.orgns/day, More Is BetterLAMMPS Molecular Dynamics Simulator 29Oct2020Model: Rhodopsin Protein321246810SE +/- 0.118, N = 3SE +/- 0.065, N = 14SE +/- 0.054, N = 38.1458.1888.1731. (CXX) g++ options: -O3 -pthread -lm
OpenBenchmarking.orgns/day, More Is BetterLAMMPS Molecular Dynamics Simulator 29Oct2020Model: Rhodopsin Protein3213691215Min: 7.97 / Avg: 8.14 / Max: 8.37Min: 7.49 / Avg: 8.19 / Max: 8.43Min: 8.09 / Avg: 8.17 / Max: 8.271. (CXX) g++ options: -O3 -pthread -lm

rav1e

Xiph rav1e is a Rust-written AV1 video encoder. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgFrames Per Second, More Is Betterrav1e 0.4Speed: 13210.09720.19440.29160.38880.486SE +/- 0.002, N = 3SE +/- 0.004, N = 3SE +/- 0.002, N = 30.4260.4230.432
OpenBenchmarking.orgFrames Per Second, More Is Betterrav1e 0.4Speed: 132112345Min: 0.42 / Avg: 0.43 / Max: 0.43Min: 0.42 / Avg: 0.42 / Max: 0.43Min: 0.43 / Avg: 0.43 / Max: 0.44

OpenBenchmarking.orgFrames Per Second, More Is Betterrav1e 0.4Speed: 53210.28170.56340.84511.12681.4085SE +/- 0.002, N = 3SE +/- 0.006, N = 3SE +/- 0.003, N = 31.2451.2371.252
OpenBenchmarking.orgFrames Per Second, More Is Betterrav1e 0.4Speed: 5321246810Min: 1.24 / Avg: 1.25 / Max: 1.25Min: 1.23 / Avg: 1.24 / Max: 1.25Min: 1.25 / Avg: 1.25 / Max: 1.26

OpenBenchmarking.orgFrames Per Second, More Is Betterrav1e 0.4Speed: 63210.37670.75341.13011.50681.8835SE +/- 0.004, N = 3SE +/- 0.009, N = 3SE +/- 0.008, N = 31.6581.6591.674
OpenBenchmarking.orgFrames Per Second, More Is Betterrav1e 0.4Speed: 6321246810Min: 1.65 / Avg: 1.66 / Max: 1.67Min: 1.64 / Avg: 1.66 / Max: 1.67Min: 1.66 / Avg: 1.67 / Max: 1.69

OpenBenchmarking.orgFrames Per Second, More Is Betterrav1e 0.4Speed: 103210.81831.63662.45493.27324.0915SE +/- 0.027, N = 3SE +/- 0.014, N = 3SE +/- 0.014, N = 33.6183.6003.637
OpenBenchmarking.orgFrames Per Second, More Is Betterrav1e 0.4Speed: 10321246810Min: 3.56 / Avg: 3.62 / Max: 3.65Min: 3.57 / Avg: 3.6 / Max: 3.62Min: 3.61 / Avg: 3.64 / Max: 3.66

Mobile Neural Network

MNN is the Mobile Neural Network as a highly efficient, lightweight deep learning framework developed by Alibaba. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgms, Fewer Is BetterMobile Neural Network 1.1.1Model: SqueezeNetV1.0321246810SE +/- 0.067, N = 3SE +/- 0.090, N = 3SE +/- 0.058, N = 37.0037.0127.149MIN: 6.59 / MAX: 18.5MIN: 6.58 / MAX: 8.01MIN: 6.76 / MAX: 8.531. (CXX) g++ options: -std=c++11 -O3 -fvisibility=hidden -fomit-frame-pointer -fstrict-aliasing -ffunction-sections -fdata-sections -ffast-math -fno-rtti -fno-exceptions -rdynamic -pthread -ldl
OpenBenchmarking.orgms, Fewer Is BetterMobile Neural Network 1.1.1Model: SqueezeNetV1.03213691215Min: 6.87 / Avg: 7 / Max: 7.09Min: 6.84 / Avg: 7.01 / Max: 7.13Min: 7.09 / Avg: 7.15 / Max: 7.271. (CXX) g++ options: -std=c++11 -O3 -fvisibility=hidden -fomit-frame-pointer -fstrict-aliasing -ffunction-sections -fdata-sections -ffast-math -fno-rtti -fno-exceptions -rdynamic -pthread -ldl

OpenBenchmarking.orgms, Fewer Is BetterMobile Neural Network 1.1.1Model: resnet-v2-50321816243240SE +/- 0.27, N = 3SE +/- 0.28, N = 3SE +/- 0.46, N = 333.2532.6933.49MIN: 32.33 / MAX: 44.74MIN: 31.91 / MAX: 44.49MIN: 32.24 / MAX: 45.41. (CXX) g++ options: -std=c++11 -O3 -fvisibility=hidden -fomit-frame-pointer -fstrict-aliasing -ffunction-sections -fdata-sections -ffast-math -fno-rtti -fno-exceptions -rdynamic -pthread -ldl
OpenBenchmarking.orgms, Fewer Is BetterMobile Neural Network 1.1.1Model: resnet-v2-50321714212835Min: 32.77 / Avg: 33.24 / Max: 33.71Min: 32.19 / Avg: 32.69 / Max: 33.17Min: 32.83 / Avg: 33.48 / Max: 34.381. (CXX) g++ options: -std=c++11 -O3 -fvisibility=hidden -fomit-frame-pointer -fstrict-aliasing -ffunction-sections -fdata-sections -ffast-math -fno-rtti -fno-exceptions -rdynamic -pthread -ldl

OpenBenchmarking.orgms, Fewer Is BetterMobile Neural Network 1.1.1Model: MobileNetV2_2243211.04222.08443.12664.16885.211SE +/- 0.107, N = 3SE +/- 0.048, N = 3SE +/- 0.049, N = 34.6324.6204.587MIN: 4.48 / MAX: 5.73MIN: 4.5 / MAX: 5.49MIN: 4.45 / MAX: 6.031. (CXX) g++ options: -std=c++11 -O3 -fvisibility=hidden -fomit-frame-pointer -fstrict-aliasing -ffunction-sections -fdata-sections -ffast-math -fno-rtti -fno-exceptions -rdynamic -pthread -ldl
OpenBenchmarking.orgms, Fewer Is BetterMobile Neural Network 1.1.1Model: MobileNetV2_224321246810Min: 4.52 / Avg: 4.63 / Max: 4.85Min: 4.54 / Avg: 4.62 / Max: 4.71Min: 4.49 / Avg: 4.59 / Max: 4.651. (CXX) g++ options: -std=c++11 -O3 -fvisibility=hidden -fomit-frame-pointer -fstrict-aliasing -ffunction-sections -fdata-sections -ffast-math -fno-rtti -fno-exceptions -rdynamic -pthread -ldl

OpenBenchmarking.orgms, Fewer Is BetterMobile Neural Network 1.1.1Model: mobilenet-v1-1.03211.01572.03143.04714.06285.0785SE +/- 0.100, N = 3SE +/- 0.094, N = 3SE +/- 0.054, N = 34.4854.4654.514MIN: 4.18 / MAX: 5.59MIN: 4.19 / MAX: 16.28MIN: 4.18 / MAX: 6.211. (CXX) g++ options: -std=c++11 -O3 -fvisibility=hidden -fomit-frame-pointer -fstrict-aliasing -ffunction-sections -fdata-sections -ffast-math -fno-rtti -fno-exceptions -rdynamic -pthread -ldl
OpenBenchmarking.orgms, Fewer Is BetterMobile Neural Network 1.1.1Model: mobilenet-v1-1.0321246810Min: 4.36 / Avg: 4.48 / Max: 4.68Min: 4.28 / Avg: 4.47 / Max: 4.58Min: 4.42 / Avg: 4.51 / Max: 4.611. (CXX) g++ options: -std=c++11 -O3 -fvisibility=hidden -fomit-frame-pointer -fstrict-aliasing -ffunction-sections -fdata-sections -ffast-math -fno-rtti -fno-exceptions -rdynamic -pthread -ldl

OpenBenchmarking.orgms, Fewer Is BetterMobile Neural Network 1.1.1Model: inception-v3321816243240SE +/- 0.53, N = 3SE +/- 0.23, N = 3SE +/- 0.17, N = 334.9734.7634.93MIN: 33.52 / MAX: 45.84MIN: 33.48 / MAX: 42.34MIN: 33.94 / MAX: 46.511. (CXX) g++ options: -std=c++11 -O3 -fvisibility=hidden -fomit-frame-pointer -fstrict-aliasing -ffunction-sections -fdata-sections -ffast-math -fno-rtti -fno-exceptions -rdynamic -pthread -ldl
OpenBenchmarking.orgms, Fewer Is BetterMobile Neural Network 1.1.1Model: inception-v3321714212835Min: 34.26 / Avg: 34.97 / Max: 36.02Min: 34.35 / Avg: 34.76 / Max: 35.12Min: 34.74 / Avg: 34.93 / Max: 35.271. (CXX) g++ options: -std=c++11 -O3 -fvisibility=hidden -fomit-frame-pointer -fstrict-aliasing -ffunction-sections -fdata-sections -ffast-math -fno-rtti -fno-exceptions -rdynamic -pthread -ldl

13 Results Shown

Quantum ESPRESSO
RELION
LAMMPS Molecular Dynamics Simulator:
  20k Atoms
  Rhodopsin Protein
rav1e:
  1
  5
  6
  10
Mobile Neural Network:
  SqueezeNetV1.0
  resnet-v2-50
  MobileNetV2_224
  mobilenet-v1-1.0
  inception-v3