Timed MAFFT Alignment

Intel Core i7-7700 testing with a Alienware 07HV66 (1.0.20 BIOS) and NVIDIA NV134 8GB on Fedora 32 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2010058-NE-TIMEDMAFF19
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Timed MAFFT Alignment - Fedora
October 05 2020
  6 Minutes


Timed MAFFT AlignmentOpenBenchmarking.orgPhoronix Test SuiteIntel Core i7-7700 @ 4.20GHz (4 Cores / 8 Threads)Alienware 07HV66 (1.0.20 BIOS)Intel Xeon E3-1200 v6/7th + Z27016GB1000GB TOSHIBA DT01ACA1NVIDIA NV134 8GB (1150MHz)Realtek ALC3861Qualcomm Atheros Killer E2400 + Intel 3165Fedora 325.8.12-200.fc32.x86_64 (x86_64)KDE Plasma 5.18.5X Server 1.20.8modesetting 1.20.84.3 Mesa 20.1.8GCC 10.2.1 20200723 + Clang 10.0.1ext41920x1080ProcessorMotherboardChipsetMemoryDiskGraphicsAudioNetworkOSKernelDesktopDisplay ServerDisplay DriverOpenGLCompilerFile-SystemScreen ResolutionTimed MAFFT Alignment BenchmarksSystem Logs- --build=x86_64-redhat-linux --disable-libunwind-exceptions --enable-__cxa_atexit --enable-bootstrap --enable-cet --enable-checking=release --enable-gnu-indirect-function --enable-gnu-unique-object --enable-initfini-array --enable-languages=c,c++,fortran,objc,obj-c++,ada,go,d,lto --enable-multilib --enable-offload-targets=nvptx-none --enable-plugin --enable-shared --enable-threads=posix --mandir=/usr/share/man --with-arch_32=i686 --with-gcc-major-version-only --with-isl --with-linker-hash-style=gnu --with-tune=generic --without-cuda-driver - Scaling Governor: intel_pstate powersave - CPU Microcode: 0xd6- SELinux + itlb_multihit: KVM: Mitigation of VMX disabled + l1tf: Mitigation of PTE Inversion; VMX: conditional cache flushes SMT vulnerable + mds: Mitigation of Clear buffers; SMT vulnerable + meltdown: Mitigation of PTI + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full generic retpoline IBPB: conditional IBRS_FW STIBP: conditional RSB filling + srbds: Mitigation of Microcode + tsx_async_abort: Mitigation of Clear buffers; SMT vulnerable

Timed MAFFT Alignment

This test performs an alignment of 100 pyruvate decarboxylase sequences. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 7.471Multiple Sequence Alignment - LSU RNATimed MAFFT Alignment - Fedora612182430SE +/- 4.12, N = 1225.561. (CC) gcc options: -std=c99 -O3 -lm -lpthread