NAMD Core i3

Intel Core i3-10100 testing with a Gigabyte B460M DS3H (F2 BIOS) and Gigabyte Intel UHD 630 3GB on Ubuntu 20.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2009035-FI-NAMDCOREI05
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September 03 2020
  9 Minutes
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September 03 2020
  8 Minutes
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September 03 2020
  8 Minutes
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NAMD Core i3OpenBenchmarking.orgPhoronix Test SuiteIntel Core i3-10100 @ 4.30GHz (4 Cores / 8 Threads)Gigabyte B460M DS3H (F2 BIOS)Intel Device 9b6316GB500GB Western Digital WDS500G3X0C-00SJG0Gigabyte Intel UHD 630 3GB (1100MHz)Realtek ALC887-VDG237HLRealtek RTL8111/8168/8411Ubuntu 20.045.9.0-050900rc1daily20200819-generic (x86_64) 20200818GNOME Shell 3.36.3X Server 1.20.8modesetting 1.20.84.6 Mesa 20.0.8GCC 9.3.0ext41920x1080ProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay ServerDisplay DriverOpenGLCompilerFile-SystemScreen ResolutionNAMD Core I3 BenchmarksSystem Logs- Scaling Governor: intel_pstate powersave - CPU Microcode: 0xcc- itlb_multihit: KVM: Mitigation of VMX disabled + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Enhanced IBRS IBPB: conditional RSB filling + srbds: Not affected + tsx_async_abort: Not affected

NAMD

NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. NAMD was developed by the Theoretical and Computational Biophysics Group in the Beckman Institute for Advanced Science and Technology at the University of Illinois at Urbana-Champaign. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgdays/ns, Fewer Is BetterNAMD 2.14ATPase Simulation - 327,506 Atomsx1x2x30.77361.54722.32083.09443.868SE +/- 0.00678, N = 3SE +/- 0.00414, N = 3SE +/- 0.00254, N = 33.438223.425793.43246
OpenBenchmarking.orgdays/ns, Fewer Is BetterNAMD 2.14ATPase Simulation - 327,506 Atomsx1x2x3246810Min: 3.42 / Avg: 3.44 / Max: 3.45Min: 3.42 / Avg: 3.43 / Max: 3.43Min: 3.43 / Avg: 3.43 / Max: 3.44