namd-results

Intel Core i5-4200U testing with a Dell 0845MX (A04 BIOS) and Intel Haswell Mobile 2GB on Debian 10 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2008292-NE-NAMDRESUL02
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Result
Identifier
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Performance Per
Dollar
Date
Run
  Test
  Duration
namd_test_run
August 29 2020
  1 Hour, 37 Minutes


namd-resultsOpenBenchmarking.orgPhoronix Test SuiteIntel Core i5-4200U @ 2.60GHz (2 Cores / 4 Threads)Dell 0845MX (A04 BIOS)Intel Haswell-ULT DRAM6GB480GB Patriot IgniteIntel Haswell Mobile 2GB (1000MHz)Intel Haswell-ULT HD AudioHP 2311Realtek RTL8101/2/6E + Qualcomm Atheros QCA9565 / AR9565Debian 104.19.0-8-amd64 (x86_64)KDE Plasma 5.14.5X Server 1.20.4modesetting 1.20.44.5 Mesa 18.3.6GCC 8.3.0ext43286x1080ProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay ServerDisplay DriverOpenGLCompilerFile-SystemScreen ResolutionNamd-results PerformanceSystem Logs- NVM_CD_FLAGS=- Scaling Governor: intel_pstate powersave - CPU Microcode: 0x25- itlb_multihit: KVM: Mitigation of Split huge pages + l1tf: Mitigation of PTE Inversion; VMX: conditional cache flushes SMT vulnerable + mds: Mitigation of Clear buffers; SMT vulnerable + meltdown: Mitigation of PTI + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full generic retpoline IBPB: conditional IBRS_FW STIBP: conditional RSB filling + tsx_async_abort: Not affected

NAMD

NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. NAMD was developed by the Theoretical and Computational Biophysics Group in the Beckman Institute for Advanced Science and Technology at the University of Illinois at Urbana-Champaign. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgdays/ns, Fewer Is BetterNAMD 2.14ATPase Simulation - 327,506 Atomsnamd_test_run48121620SE +/- 0.36, N = 914.05