namd0818

Intel Core i9-10980XE testing with a EVGA X299 DARK v1.0 (1.23 BIOS) and NVIDIA GeForce GT 730 2GB on Clear Linux OS 32550 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2008189-NE-NAMD0818514
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  Test
  Duration
Intel Core i9-10980XE
August 18 2020
  3 Minutes


namd0818OpenBenchmarking.orgPhoronix Test SuiteIntel Core i9-10980XE @ 5.00GHz (18 Cores)EVGA X299 DARK v1.0 (1.23 BIOS)Intel Sky Lake-E DMI3 Registers4 x 8192 MB DDR4-2133MT/s512GB INTEL SSDPEKKW512G8NVIDIA GeForce GT 730 2GBNVIDIA GF119 HDMI AudioDELL P2416DIntel I219-V + Intel I210Clear Linux OS 325504.19.108-120.lts2018 (x86_64)GCC 9.2.1 20200305 gcc_9_2_0_release-738-ge50627ff8c + Clang 9.0.1 + LLVM 9.0.1ext42048x1152ProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelCompilerFile-SystemScreen ResolutionNamd0818 BenchmarksSystem Logs- CFFLAGS="-g -O3 -feliminate-unused-debug-types -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=32 -m64 -fasynchronous-unwind-tables -Wp,-D_REENTRANT -ftree-loop-distribute-patterns -Wl,-z -Wl,now -Wl,-z -Wl,relro -malign-data=abi -fno-semantic-interposition -ftree-vectorize -ftree-loop-vectorize -Wl,-sort-common -Wl,--enable-new-dtags" FFLAGS="-g -O3 -feliminate-unused-debug-types -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=32 -m64 -fasynchronous-unwind-tables -Wp,-D_REENTRANT -ftree-loop-distribute-patterns -Wl,-z -Wl,now -Wl,-z -Wl,relro -malign-data=abi -fno-semantic-interposition -ftree-vectorize -ftree-loop-vectorize -Wl,--enable-new-dtags -Wa,-mbranches-within-32B-boundaries" CXXFLAGS="-g -O3 -feliminate-unused-debug-types -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=32 -Wformat -Wformat-security -m64 -fasynchronous-unwind-tables -Wp,-D_REENTRANT -ftree-loop-distribute-patterns -Wl,-z -Wl,now -Wl,-z -Wl,relro -fno-semantic-interposition -ffat-lto-objects -fno-trapping-math -Wl,-sort-common -Wl,--enable-new-dtags -mtune=skylake -Wa,-mbranches-within-32B-boundaries -fvisibility-inlines-hidden -Wl,--enable-new-dtags" CFLAGS="-g -O3 -feliminate-unused-debug-types -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=32 -Wformat -Wformat-security -m64 -fasynchronous-unwind-tables -Wp,-D_REENTRANT -ftree-loop-distribute-patterns -Wl,-z -Wl,now -Wl,-z -Wl,relro -fno-semantic-interposition -ffat-lto-objects -fno-trapping-math -Wl,-sort-common -Wl,--enable-new-dtags -mtune=skylake -Wa,-mbranches-within-32B-boundaries" THEANO_FLAGS="floatX=float32,openmp=true,gcc.cxxflags="-ftree-vectorize -mavx"" - Scaling Governor: intel_pstate performance - CPU Microcode: 0x500012c- itlb_multihit: KVM: Vulnerable + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Vulnerable + spectre_v1: Vulnerable: __user pointer sanitization and usercopy barriers only; no swapgs barriers + spectre_v2: Vulnerable IBPB: disabled STIBP: disabled + tsx_async_abort: Mitigation of TSX disabled

NAMD

NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. NAMD was developed by the Theoretical and Computational Biophysics Group in the Beckman Institute for Advanced Science and Technology at the University of Illinois at Urbana-Champaign. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgdays/ns, Fewer Is BetterNAMD 2.13ATPase Simulation - 327,506 AtomsIntel Core i9-10980XE0.17640.35280.52920.70560.882SE +/- 0.00201, N = 30.78397