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testa

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Bioinformatics 3 Tests
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April 29 2012
 
testa
August 01 2020
  1 Hour, 3 Minutes
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test

Processor: AMD Phenom II X4 945 @ 3.00GHz (4 Cores), Motherboard: Gigabyte GA-MA78GM-S2H, Memory: 6144MB, Disk: 160GB Seagate ST3160215AS, Graphics: Gallium 0.4 on AMD RS780 512MB, Audio: Realtek ALC889A, Monitor: PLE2607WS

OS: Calculate Linux Desktop 11.15 GNOME, Kernel: 3.3.3-calculate (x86_64), Desktop: GNOME Shell 3.2.2.1, Display Server: X Server 1.11.2, OpenGL: 2.1 Mesa 7.11.2 Gallium 0.4, Compiler: GCC 4.5.3 + LLVM 2.9, File-System: ext4, Screen Resolution: 1920x1200

testa

Processor: Intel Core i7-4600M @ 3.60GHz (2 Cores / 4 Threads), Motherboard: HP 1909 (L70 Ver. 01.45 BIOS), Chipset: Intel Xeon E3-1200 v3/4th, Memory: 16GB, Disk: 2000GB Samsung SSD 860, Graphics: NVIDIA NVE6 2GB, Audio: IDT 92HD91BXX, Network: Intel I217-LM + Intel Centrino Advanced-N 6235

OS: NuTyX rolling, Kernel: 5.4.54-NuTyX-54 (x86_64), Display Server: X Server 1.20.8, Display Driver: nouveau 1.0.16, OpenGL: 4.3 Mesa 20.1.4, Compiler: GCC 10.2.0, File-System: xfs, Screen Resolution: 1920x1080

Processor Notes: Scaling Governor: intel_pstate powersave - CPU Microcode: 0x27
Security Notes: itlb_multihit: KVM: Vulnerable + l1tf: Mitigation of PTE Inversion + mds: Mitigation of Clear buffers; SMT vulnerable + meltdown: Mitigation of PTI + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full generic retpoline IBPB: conditional IBRS_FW STIBP: conditional RSB filling + srbds: Vulnerable: No microcode + tsx_async_abort: Not affected

phoronixProcessorMotherboardMemoryDiskGraphicsAudioMonitorChipsetNetworkOSKernelDesktopDisplay ServerOpenGLCompilerFile-SystemScreen ResolutionDisplay DrivertesttestaAMD Phenom II X4 945 @ 3.00GHz (4 Cores)Gigabyte GA-MA78GM-S2H6144MB160GB Seagate ST3160215ASGallium 0.4 on AMD RS780 512MBRealtek ALC889APLE2607WSCalculate Linux Desktop 11.15 GNOME3.3.3-calculate (x86_64)GNOME Shell 3.2.2.1X Server 1.11.22.1 Mesa 7.11.2 Gallium 0.4GCC 4.5.3 + LLVM 2.9ext41920x1200Intel Core i7-4600M @ 3.60GHz (2 Cores / 4 Threads)HP 1909 (L70 Ver. 01.45 BIOS)Intel Xeon E3-1200 v3/4th16GB2000GB Samsung SSD 860NVIDIA NVE6 2GBIDT 92HD91BXXIntel I217-LM + Intel Centrino Advanced-N 6235NuTyX rolling5.4.54-NuTyX-54 (x86_64)X Server 1.20.8nouveau 1.0.164.3 Mesa 20.1.4GCC 10.2.0xfs1920x1080OpenBenchmarking.orgProcessor Details- testa: Scaling Governor: intel_pstate powersave - CPU Microcode: 0x27Security Details- testa: itlb_multihit: KVM: Vulnerable + l1tf: Mitigation of PTE Inversion + mds: Mitigation of Clear buffers; SMT vulnerable + meltdown: Mitigation of PTI + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full generic retpoline IBPB: conditional IBRS_FW STIBP: conditional RSB filling + srbds: Vulnerable: No microcode + tsx_async_abort: Not affected

test vs. testa ComparisonPhoronix Test SuiteBaseline+60.2%+60.2%+120.4%+120.4%+180.6%+180.6%240.8%215.5%93%78.7%54.3%43.9%42.3%37.4%31.6%P.P.SIS.CTotal TimeLU.AElapsed TimeM.S.AUA.AP.D.SG.I.R.1.SBlowfish25.6%Time To Compile14.2%Himeno BenchmarkNAS Parallel BenchmarksC-RayNAS Parallel BenchmarksCraftyTimed MAFFT AlignmentNAS Parallel BenchmarksTimed HMMer SearchSmallptJohn The RipperTimed PHP Compilationtesttesta

phoronixcompress-7zip: Compress Speed Testcompress-pbzip2: 256MB File Compressionx264: H.264 Video Encodingopenssl: RSA 4096-bit Performancegcrypt: CAMELLIA256-ECB Cipherjohn-the-ripper: Blowfishgraphics-magick: Local Adaptive Thresholdinggraphics-magick: Resizinghimeno: Poisson Pressure Solverc-ray: Total Timesmallpt: Global Illumination Renderer; 100 Samplescrafty: Elapsed Timehmmer: Pfam Database Searchmafft: Multiple Sequence Alignmentminion: Quasigroupminion: Solitairenpb: EP.Bnpb: IS.Cnpb: LU.Anpb: UA.Abuild-php: Time To Compiletesttesta862317.1463.2656.65320033994399508.7993.79204113.5925.1113.07233.02389.5887.6468.994446.4418.3854.5227061733.92717848.59115573.6218.2729.085217.637944.5426.1662.274OpenBenchmarking.org

7-Zip Compression

OpenBenchmarking.orgMIPS, More Is Better7-Zip Compression 9.20.1Compress Speed Testtest2K4K6K8K10KSE +/- 14.98, N = 386231. (CXX) g++ options: -pipe -lpthread

Parallel BZIP2 Compression

OpenBenchmarking.orgSeconds, Fewer Is BetterParallel BZIP2 Compression 1.0.5256MB File Compressiontest48121620SE +/- 0.02, N = 317.141. (CXX) g++ options: -O2 -pthread -lpthread -lbz2

x264

OpenBenchmarking.orgFrames Per Second, More Is Betterx264 2011-12-06H.264 Video Encodingtest1428425670SE +/- 0.11, N = 363.26

OpenSSL

OpenBenchmarking.orgSigns Per Second, More Is BetterOpenSSL 1.0.0eRSA 4096-bit Performancetest1326395265SE +/- 0.05, N = 456.651. (CC) gcc options: -m64 -O3 -lssl -lcrypto -ldl

Gcrypt Library

OpenBenchmarking.orgMicroseconds, Fewer Is BetterGcrypt Library 1.4.4CAMELLIA256-ECB Ciphertest7001400210028003500SE +/- 5.77, N = 332001. (CC) gcc options: -O2 -fvisibility=hidden

John The Ripper

OpenBenchmarking.orgReal C/S, More Is BetterJohn The Ripper 1.7.9Test: Blowfishtesttesta7001400210028003500SE +/- 2.08, N = 3SE +/- 113.72, N = 15339927061. (CC) gcc options: -fopenmp -lcrypt
OpenBenchmarking.orgReal C/S, More Is BetterJohn The Ripper 1.7.9Test: Blowfishtesttesta6001200180024003000Min: 3396 / Avg: 3399 / Max: 3403Min: 1608 / Avg: 2705.93 / Max: 30621. (CC) gcc options: -fopenmp -lcrypt

GraphicsMagick

OpenBenchmarking.orgIterations Per Minute, More Is BetterGraphicsMagick 1.3.12Operation: Local Adaptive Thresholdingtest1020304050SE +/- 0.00, N = 3431. (CC) gcc options: -std=gnu99 -fopenmp -O2 -pthread -llcms -ltiff -lfreetype -ljasper -ljpeg -lwmflite -lXext -lSM -lICE -lX11 -lbz2 -lxml2 -lz -lm -lrt -lpthread

OpenBenchmarking.orgIterations Per Minute, More Is BetterGraphicsMagick 1.3.12Operation: Resizingtest20406080100SE +/- 0.33, N = 3991. (CC) gcc options: -std=gnu99 -fopenmp -O2 -pthread -llcms -ltiff -lfreetype -ljasper -ljpeg -lwmflite -lXext -lSM -lICE -lX11 -lbz2 -lxml2 -lz -lm -lrt -lpthread

Himeno Benchmark

The Himeno benchmark is a linear solver of pressure Poisson using a point-Jacobi method. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgMFLOPS, More Is BetterHimeno Benchmark 3.0Poisson Pressure Solvertesttesta400800120016002000SE +/- 1.26, N = 3SE +/- 27.49, N = 3508.791733.931. (CC) gcc options: -O3
OpenBenchmarking.orgMFLOPS, More Is BetterHimeno Benchmark 3.0Poisson Pressure Solvertesttesta30060090012001500Min: 506.41 / Avg: 508.79 / Max: 510.71Min: 1678.99 / Avg: 1733.93 / Max: 1763.351. (CC) gcc options: -O3

C-Ray

This is a test of C-Ray, a simple raytracer designed to test the floating-point CPU performance. This test is multi-threaded (16 threads per core), will shoot 8 rays per pixel for anti-aliasing, and will generate a 1600 x 1200 image. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterC-Ray 1.1Total Timetesttesta20406080100SE +/- 0.01, N = 3SE +/- 0.26, N = 393.7948.591. (CC) gcc options: -lm -lpthread -O3
OpenBenchmarking.orgSeconds, Fewer Is BetterC-Ray 1.1Total Timetesttesta20406080100Min: 93.77 / Avg: 93.79 / Max: 93.81Min: 48.3 / Avg: 48.59 / Max: 49.111. (CC) gcc options: -lm -lpthread -O3

Smallpt

Smallpt is a C++ global illumination renderer written in less than 100 lines of code. Global illumination is done via unbiased Monte Carlo path tracing and there is multi-threading support via the OpenMP library. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterSmallpt 1.0Global Illumination Renderer; 100 Samplestesttesta4080120160200SE +/- 0.00, N = 32041551. (CXX) g++ options: -fopenmp
OpenBenchmarking.orgSeconds, Fewer Is BetterSmallpt 1.0Global Illumination Renderer; 100 Samplestesttesta4080120160200Min: 204 / Avg: 204 / Max: 2041. (CXX) g++ options: -fopenmp

Crafty

OpenBenchmarking.orgSeconds, Fewer Is BetterCrafty 23.4Elapsed Timetesttesta306090120150SE +/- 0.23, N = 3SE +/- 0.52, N = 3113.5973.621. (CC) gcc options: -lstdc++ -lm
OpenBenchmarking.orgSeconds, Fewer Is BetterCrafty 23.4Elapsed Timetesttesta20406080100Min: 113.3 / Avg: 113.59 / Max: 114.05Min: 72.59 / Avg: 73.62 / Max: 74.211. (CC) gcc options: -lstdc++ -lm

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchtesttesta612182430SE +/- 0.15, N = 3SE +/- 0.21, N = 1525.1118.271. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchtesttesta612182430Min: 24.81 / Avg: 25.11 / Max: 25.27Min: 17.35 / Avg: 18.27 / Max: 19.811. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmenttesttesta3691215SE +/- 0.002, N = 3SE +/- 0.095, N = 1513.0709.0851. (CC) gcc options: -O3 -lm -lpthread
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmenttesttesta48121620Min: 13.07 / Avg: 13.07 / Max: 13.07Min: 8.35 / Avg: 9.08 / Max: 9.871. (CC) gcc options: -O3 -lm -lpthread

Minion

OpenBenchmarking.orgSeconds, Fewer Is BetterMinion 0.12Benchmark: Quasigrouptest50100150200250SE +/- 1.68, N = 3233.021. (CXX) g++ options: -O3 -fomit-frame-pointer -rdynamic -lboost_iostreams-mt -lz -lbz2

OpenBenchmarking.orgSeconds, Fewer Is BetterMinion 0.12Benchmark: Solitairetest80160240320400SE +/- 56.11, N = 6389.581. (CXX) g++ options: -O3 -fomit-frame-pointer -rdynamic -lboost_iostreams-mt -lz -lbz2

NAS Parallel Benchmarks

OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: EP.Btest20406080100SE +/- 0.38, N = 387.641. (F9X) gfortran options: -fopenmp

OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: IS.Ctesttesta50100150200250SE +/- 0.98, N = 6SE +/- 0.09, N = 368.99217.631. (F9X) gfortran options: -fopenmp
OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: IS.Ctesttesta4080120160200Min: 67.4 / Avg: 68.99 / Max: 72.1Min: 217.46 / Avg: 217.63 / Max: 217.751. (F9X) gfortran options: -fopenmp

OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: LU.Atesttesta2K4K6K8K10KSE +/- 16.48, N = 3SE +/- 58.31, N = 34446.447944.541. (F9X) gfortran options: -fopenmp
OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: LU.Atesttesta14002800420056007000Min: 4428.86 / Avg: 4446.44 / Max: 4479.38Min: 7829.02 / Avg: 7944.54 / Max: 8016.171. (F9X) gfortran options: -fopenmp

OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: UA.Atesttesta612182430SE +/- 0.12, N = 3SE +/- 0.97, N = 1418.3826.161. (F9X) gfortran options: -fopenmp
OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: UA.Atesttesta612182430Min: 18.25 / Avg: 18.38 / Max: 18.61Min: 14.39 / Avg: 26.16 / Max: 28.321. (F9X) gfortran options: -fopenmp

Timed PHP Compilation

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed PHP Compilation 5.2.9Time To Compiletesttesta1428425670SE +/- 0.45, N = 3SE +/- 0.97, N = 1554.5262.271. (CC) gcc options: -O2 -pedantic -ldl -lz -lm
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed PHP Compilation 5.2.9Time To Compiletesttesta1224364860Min: 53.7 / Avg: 54.52 / Max: 55.24Min: 60.46 / Avg: 62.27 / Max: 73.891. (CC) gcc options: -O2 -pedantic -ldl -lz -lm

test

Processor: AMD Phenom II X4 945 @ 3.00GHz (4 Cores), Motherboard: Gigabyte GA-MA78GM-S2H, Memory: 6144MB, Disk: 160GB Seagate ST3160215AS, Graphics: Gallium 0.4 on AMD RS780 512MB, Audio: Realtek ALC889A, Monitor: PLE2607WS

OS: Calculate Linux Desktop 11.15 GNOME, Kernel: 3.3.3-calculate (x86_64), Desktop: GNOME Shell 3.2.2.1, Display Server: X Server 1.11.2, OpenGL: 2.1 Mesa 7.11.2 Gallium 0.4, Compiler: GCC 4.5.3 + LLVM 2.9, File-System: ext4, Screen Resolution: 1920x1200

Testing initiated at 29 April 2012 14:57 by user olivier.

testa

Processor: Intel Core i7-4600M @ 3.60GHz (2 Cores / 4 Threads), Motherboard: HP 1909 (L70 Ver. 01.45 BIOS), Chipset: Intel Xeon E3-1200 v3/4th, Memory: 16GB, Disk: 2000GB Samsung SSD 860, Graphics: NVIDIA NVE6 2GB, Audio: IDT 92HD91BXX, Network: Intel I217-LM + Intel Centrino Advanced-N 6235

OS: NuTyX rolling, Kernel: 5.4.54-NuTyX-54 (x86_64), Display Server: X Server 1.20.8, Display Driver: nouveau 1.0.16, OpenGL: 4.3 Mesa 20.1.4, Compiler: GCC 10.2.0, File-System: xfs, Screen Resolution: 1920x1080

Processor Notes: Scaling Governor: intel_pstate powersave - CPU Microcode: 0x27
Security Notes: itlb_multihit: KVM: Vulnerable + l1tf: Mitigation of PTE Inversion + mds: Mitigation of Clear buffers; SMT vulnerable + meltdown: Mitigation of PTI + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full generic retpoline IBPB: conditional IBRS_FW STIBP: conditional RSB filling + srbds: Vulnerable: No microcode + tsx_async_abort: Not affected

Testing initiated at 1 August 2020 20:54 by user root.