Xeon Silver 4216 GROMACS

Intel Xeon Silver 4216 testing with a TYAN S7100AG2NR (V4.02 BIOS) and ASPEED on Clear Linux OS 32400 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2002260-VE-XEONSILVE31
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Result
Identifier
Performance Per
Dollar
Date
Run
  Test
  Duration
Xeon Silver 4216
February 26 2020
  7 Minutes


Xeon Silver 4216 GROMACSOpenBenchmarking.orgPhoronix Test SuiteIntel Xeon Silver 4216 @ 3.20GHz (16 Cores / 32 Threads)TYAN S7100AG2NR (V4.02 BIOS)Intel Sky Lake-E DMI3 Registers24GB240GB Force MP500ASPEEDRealtek ALC8922 x Intel I350Clear Linux OS 324005.5.6-914.native (x86_64)GNOME Shell 3.34.3X ServerGCC 9.2.1 20200224 gcc_9_2_0_release-659-gf9be6e10c9 + Clang 9.0.1 + LLVM 9.0.1ext41024x768ProcessorMotherboardChipsetMemoryDiskGraphicsAudioNetworkOSKernelDesktopDisplay ServerCompilerFile-SystemScreen ResolutionXeon Silver 4216 GROMACS BenchmarksSystem Logs- CFFLAGS="-g -O3 -feliminate-unused-debug-types -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=32 -m64 -fasynchronous-unwind-tables -Wp,-D_REENTRANT -ftree-loop-distribute-patterns -Wl,-z -Wl,now -Wl,-z -Wl,relro -malign-data=abi -fno-semantic-interposition -ftree-vectorize -ftree-loop-vectorize -Wl,-sort-common -Wl,--enable-new-dtags" FFLAGS="-g -O3 -feliminate-unused-debug-types -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=32 -m64 -fasynchronous-unwind-tables -Wp,-D_REENTRANT -ftree-loop-distribute-patterns -Wl,-z -Wl,now -Wl,-z -Wl,relro -malign-data=abi -fno-semantic-interposition -ftree-vectorize -ftree-loop-vectorize -Wl,--enable-new-dtags -Wa,-mbranches-within-32B-boundaries" CXXFLAGS="-g -O3 -feliminate-unused-debug-types -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=32 -Wformat -Wformat-security -m64 -fasynchronous-unwind-tables -Wp,-D_REENTRANT -ftree-loop-distribute-patterns -Wl,-z -Wl,now -Wl,-z -Wl,relro -fno-semantic-interposition -ffat-lto-objects -fno-trapping-math -Wl,-sort-common -Wl,--enable-new-dtags -mtune=skylake -Wa,-mbranches-within-32B-boundaries -fvisibility-inlines-hidden -Wl,--enable-new-dtags" CFLAGS="-g -O3 -feliminate-unused-debug-types -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=32 -Wformat -Wformat-security -m64 -fasynchronous-unwind-tables -Wp,-D_REENTRANT -ftree-loop-distribute-patterns -Wl,-z -Wl,now -Wl,-z -Wl,relro -fno-semantic-interposition -ffat-lto-objects -fno-trapping-math -Wl,-sort-common -Wl,--enable-new-dtags -mtune=skylake -Wa,-mbranches-within-32B-boundaries" THEANO_FLAGS="floatX=float32,openmp=true,gcc.cxxflags="-ftree-vectorize -mavx"" - --build=x86_64-generic-linux --disable-libmpx --disable-libunwind-exceptions --disable-multiarch --disable-vtable-verify --disable-werror --enable-__cxa_atexit --enable-bootstrap --enable-cet --enable-clocale=gnu --enable-default-pie --enable-gnu-indirect-function --enable-languages=c,c++,fortran,go --enable-ld=default --enable-libstdcxx-pch --enable-lto --enable-multilib --enable-plugin --enable-shared --enable-threads=posix --exec-prefix=/usr --includedir=/usr/include --target=x86_64-generic-linux --with-arch=westmere --with-gcc-major-version-only --with-glibc-version=2.19 --with-gnu-ld --with-isl --with-ppl=yes --with-tune=haswell - Scaling Governor: intel_pstate performance - CPU Microcode: 0x500002c- itlb_multihit: KVM: Mitigation of Split huge pages + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Enhanced IBRS IBPB: conditional RSB filling + tsx_async_abort: Mitigation of TSX disabled

GROMACS

OpenBenchmarking.orgNs Per Day, More Is BetterGROMACS 2020Water BenchmarkXeon Silver 42160.30420.60840.91261.21681.521SE +/- 0.002, N = 31.3521. (CXX) g++ options: -O3 -pipe -fexceptions -fstack-protector -m64 -ffat-lto-objects -fno-trapping-math -mtune=skylake -pthread -lrt -lpthread -lm