mafft_bench

2 x Intel Xeon E5-2670 0 testing with a HP 158B v1.01 (J63 v03.94 BIOS) and NVIDIA Quadro K4000 3GB on Ubuntu 18.04 via the Phoronix Test Suite.

HTML result view exported from: https://openbenchmarking.org/result/2001168-HU-MAFFTBENC27.

mafft_benchProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay ServerDisplay DriverCompilerFile-SystemScreen Resolutionmaft12 x Intel Xeon E5-2670 0 @ 3.30GHz (16 Cores / 32 Threads)HP 158B v1.01 (J63 v03.94 BIOS)Intel Xeon E5/Core64512MB2048GB INTEL SSDPEKNW020T8 + 500GB Seagate ST3500418AS + 2000GB Western Digital WD200MFYYZ-0 + 250GB Samsung SSD 860NVIDIA Quadro K4000 3GB (324/324MHz)Realtek ALC262MonitorIntel 82579LM + Intel 82574LUbuntu 18.045.0.0-37-generic (x86_64)GNOME Shell 3.28.4X Server 1.20.4NVIDIA 435.21GCC 7.4.0ext43000x2034OpenBenchmarking.org- --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++ --enable-libmpx --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib --with-tune=generic --without-cuda-driver -v - Scaling Governor: intel_pstate powersave - CPU Microcode: 0x718- itlb_multihit: KVM: Mitigation of Split huge pages + l1tf: Mitigation of PTE Inversion; VMX: conditional cache flushes SMT vulnerable + mds: Mitigation of Clear buffers; SMT vulnerable + meltdown: Mitigation of PTI + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full generic retpoline IBPB: conditional IBRS_FW STIBP: conditional RSB filling + tsx_async_abort: Not affected

mafft_benchmafft: Multiple Sequence AlignmentStandard ErrorStandard Deviationmaft14.1930.098.27%OpenBenchmarking.org

Timed MAFFT Alignment

Multiple Sequence Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 7.392Multiple Sequence Alignmentmaft10.94341.88682.83023.77364.717SE +/- 0.090, N = 154.1931. (CC) gcc options: -std=c99 -O3 -lm -lpthread

Phoronix Test Suite v10.8.4