fsdf

sdf

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sdf
May 15 2019
  3 Minutes
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fsdfOpenBenchmarking.orgPhoronix Test SuiteIntel Xeon E5-2667 v4 @ 3.60GHz (8 Cores)Intel S2600WT2R (SE5C610.86B.01.01.0018.072020161249 BIOS)Intel Xeon E7 v4/Xeon8 x 8192 MB DDR4-2134MT/s Micron 18ASF1G72PDZ-2G3B18000GB RMS25CB040 + 511GB RMS25CB040Matrox MGA G200e [Pilot]2 x Intel I350CentOS 7.6.18103.10.0-957.12.1.el7.x86_64 (x86_64)X ServerGCC 4.8.5 20150623xfsProcessorMotherboardChipsetMemoryDiskGraphicsNetworkOSKernelDisplay ServerCompilerFile-SystemFsdf BenchmarksSystem Logs- Scaling Governor: intel_pstate powersave- KPTI + Load fences __user pointer sanitization + Retpoline without IBPB + PTE Inversion

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchsdf246810SE +/- 0.10, N = 127.911. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

This test performs an alignment of 100 pyruvate decarboxylase sequences. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 7.392Multiple Sequence Alignmentsdf0.98551.9712.95653.9424.9275SE +/- 0.13, N = 94.381. (CC) gcc options: -std=c99 -O3 -lm -lpthread