p32-u16-multicore

p32-u18-multicore

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Bioinformatics 3 Tests
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p32-u16-multicore
April 08 2019
 
p32-u18-multicore
April 08 2019
 
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p32-u16-multicoreProcessorMotherboardChipsetMemoryDiskGraphicsNetworkOSKernelCompilerFile-SystemSystem Layerp32-u16-multicorep32-u18-multicore8 x Intel Xeon E5-2630 v3 @ 2.40GHz (8 Cores)OpenStack Foundation Nova v14.0.8Intel 440FX- 82441FX PMC1 x 8192 MB RAM QEMU78GBCirrus Logic GD 5446Red Hat Virtio deviceUbuntu 16.044.10.0-42-generic (x86_64)GCC 5.4.0 20160609ext4KVMUbuntu 18.044.15.0-46-generic (x86_64)OpenBenchmarking.orgCompiler Details- p32-u16-multicore: --build=x86_64-linux-gnu --disable-browser-plugin --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --enable-libmpx --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-arch-directory=amd64 --with-default-libstdcxx-abi=new --with-multilib-list=m32,m64,mx32 --with-tune=generic -v - p32-u18-multicore: --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++ --enable-libmpx --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib --with-tune=generic --without-cuda-driver -v

p32-u16-multicore vs. p32-u18-multicore ComparisonPhoronix Test SuiteBaseline+3.8%+3.8%+7.6%+7.6%+11.4%+11.4%+15.2%+15.2%8.9%5.4%Total Time - 4.1.R.P.P15.3%M.S.A15.1%Time To Compile14.5%P.D.SL.A.T8.1%Resizing7.1%R.4.b.P7%G.I.R.1.SElapsed Time4.2%P.P.S3.4%2.F.C2%C-RayTimed MAFFT AlignmentTimed PHP CompilationTimed HMMer SearchGraphicsMagickGraphicsMagickOpenSSLSmallptCraftyHimeno BenchmarkParallel BZIP2 Compressionp32-u16-multicorep32-u18-multicore

p32-u16-multicorehmmer: Pfam Database Searchmafft: Multiple Sequence Alignmentcrafty: Elapsed Timegraphics-magick: Resizinggraphics-magick: Local Adaptive Thresholdinghimeno: Poisson Pressure Solvercompress-7zip: Compress Speed Testbuild-php: Time To Compilec-ray: Total Time - 4K, 16 Rays Per Pixelcompress-pbzip2: 256MB File Compressionsmallpt: Global Illumination Renderer; 128 Samplesopenssl: RSA 4096-bit Performancep32-u16-multicorep32-u18-multicore10.164.255038018150671313.562135783.89157.778.9131.05888.909.334.894835252140621270.602151896.07181.979.0929.47831.13OpenBenchmarking.org

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchp32-u16-multicorep32-u18-multicore3691215SE +/- 0.02, N = 3SE +/- 0.03, N = 310.169.331. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchp32-u16-multicorep32-u18-multicore3691215Min: 10.13 / Avg: 10.16 / Max: 10.2Min: 9.28 / Avg: 9.33 / Max: 9.41. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

This test performs an alignment of 100 pyruvate decarboxylase sequences. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 7.392Multiple Sequence Alignmentp32-u16-multicorep32-u18-multicore1.10032.20063.30094.40125.5015SE +/- 0.08, N = 3SE +/- 0.08, N = 44.254.891. (CC) gcc options: -std=c99 -O3 -lm -lpthread
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 7.392Multiple Sequence Alignmentp32-u16-multicorep32-u18-multicore246810Min: 4.1 / Avg: 4.25 / Max: 4.38Min: 4.75 / Avg: 4.89 / Max: 5.111. (CC) gcc options: -std=c99 -O3 -lm -lpthread

Crafty

This is a performance test of Crafty, an advanced open-source chess engine. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgNodes Per Second, More Is BetterCrafty 25.2Elapsed Timep32-u16-multicorep32-u18-multicore1.1M2.2M3.3M4.4M5.5MSE +/- 3720.59, N = 3SE +/- 8945.91, N = 3503801848352521. (CC) gcc options: -pthread -lstdc++ -fprofile-use -lm
OpenBenchmarking.orgNodes Per Second, More Is BetterCrafty 25.2Elapsed Timep32-u16-multicorep32-u18-multicore900K1800K2700K3600K4500KMin: 5033555 / Avg: 5038018 / Max: 5045406Min: 4817396 / Avg: 4835251.67 / Max: 48451641. (CC) gcc options: -pthread -lstdc++ -fprofile-use -lm

GraphicsMagick

This is a test of GraphicsMagick with its OpenMP implementation that performs various imaging tests to stress the system's CPU. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgIterations Per Minute, More Is BetterGraphicsMagick 1.3.30Operation: Resizingp32-u16-multicorep32-u18-multicore306090120150SE +/- 0.33, N = 3SE +/- 0.33, N = 31501401. (CC) gcc options: -fopenmp -O2 -pthread -lz -lm -lgomp -lpthread
OpenBenchmarking.orgIterations Per Minute, More Is BetterGraphicsMagick 1.3.30Operation: Resizingp32-u16-multicorep32-u18-multicore306090120150Min: 149 / Avg: 149.67 / Max: 150Min: 140 / Avg: 140.33 / Max: 1411. (CC) gcc options: -fopenmp -O2 -pthread -lz -lm -lgomp -lpthread

OpenBenchmarking.orgIterations Per Minute, More Is BetterGraphicsMagick 1.3.30Operation: Local Adaptive Thresholdingp32-u16-multicorep32-u18-multicore1530456075SE +/- 0.00, N = 3SE +/- 0.00, N = 367621. (CC) gcc options: -fopenmp -O2 -pthread -lz -lm -lgomp -lpthread
OpenBenchmarking.orgIterations Per Minute, More Is BetterGraphicsMagick 1.3.30Operation: Local Adaptive Thresholdingp32-u16-multicorep32-u18-multicore1326395265Min: 67 / Avg: 67 / Max: 67Min: 62 / Avg: 62 / Max: 621. (CC) gcc options: -fopenmp -O2 -pthread -lz -lm -lgomp -lpthread

Himeno Benchmark

The Himeno benchmark is a linear solver of pressure Poisson using a point-Jacobi method. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgMFLOPS, More Is BetterHimeno Benchmark 3.0Poisson Pressure Solverp32-u16-multicorep32-u18-multicore30060090012001500SE +/- 2.53, N = 3SE +/- 0.62, N = 31313.561270.601. (CC) gcc options: -O3 -mavx2
OpenBenchmarking.orgMFLOPS, More Is BetterHimeno Benchmark 3.0Poisson Pressure Solverp32-u16-multicorep32-u18-multicore2004006008001000Min: 1309.01 / Avg: 1313.56 / Max: 1317.77Min: 1269.84 / Avg: 1270.6 / Max: 1271.821. (CC) gcc options: -O3 -mavx2

7-Zip Compression

This is a test of 7-Zip using p7zip with its integrated benchmark feature or upstream 7-Zip for the Windows x64 build. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgMIPS, More Is Better7-Zip Compression 16.02Compress Speed Testp32-u16-multicorep32-u18-multicore5K10K15K20K25KSE +/- 173.35, N = 3SE +/- 139.36, N = 321357215181. (CXX) g++ options: -pipe -lpthread
OpenBenchmarking.orgMIPS, More Is Better7-Zip Compression 16.02Compress Speed Testp32-u16-multicorep32-u18-multicore4K8K12K16K20KMin: 21118 / Avg: 21357 / Max: 21694Min: 21374 / Avg: 21518.33 / Max: 217971. (CXX) g++ options: -pipe -lpthread

Timed PHP Compilation

This test times how long it takes to build PHP 5 with the Zend engine. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed PHP Compilation 7.1.9Time To Compilep32-u16-multicorep32-u18-multicore20406080100SE +/- 0.25, N = 3SE +/- 0.33, N = 383.8996.071. (CC) gcc options: -O2 -pedantic -ldl -lz -lm
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed PHP Compilation 7.1.9Time To Compilep32-u16-multicorep32-u18-multicore20406080100Min: 83.42 / Avg: 83.89 / Max: 84.29Min: 95.64 / Avg: 96.07 / Max: 96.721. (CC) gcc options: -O2 -pedantic -ldl -lz -lm

C-Ray

This is a test of C-Ray, a simple raytracer designed to test the floating-point CPU performance. This test is multi-threaded (16 threads per core), will shoot 8 rays per pixel for anti-aliasing, and will generate a 1600 x 1200 image. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterC-Ray 1.1Total Time - 4K, 16 Rays Per Pixelp32-u16-multicorep32-u18-multicore4080120160200SE +/- 0.70, N = 3SE +/- 0.41, N = 3157.77181.971. (CC) gcc options: -lm -lpthread -O3
OpenBenchmarking.orgSeconds, Fewer Is BetterC-Ray 1.1Total Time - 4K, 16 Rays Per Pixelp32-u16-multicorep32-u18-multicore306090120150Min: 156.59 / Avg: 157.77 / Max: 159.01Min: 181.23 / Avg: 181.97 / Max: 182.661. (CC) gcc options: -lm -lpthread -O3

Parallel BZIP2 Compression

This test measures the time needed to compress a file (a .tar package of the Linux kernel source code) using BZIP2 compression. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterParallel BZIP2 Compression 1.1.12256MB File Compressionp32-u16-multicorep32-u18-multicore3691215SE +/- 0.02, N = 3SE +/- 0.12, N = 38.919.091. (CXX) g++ options: -O2 -pthread -lbz2 -lpthread
OpenBenchmarking.orgSeconds, Fewer Is BetterParallel BZIP2 Compression 1.1.12256MB File Compressionp32-u16-multicorep32-u18-multicore3691215Min: 8.88 / Avg: 8.91 / Max: 8.95Min: 8.96 / Avg: 9.09 / Max: 9.341. (CXX) g++ options: -O2 -pthread -lbz2 -lpthread

Smallpt

Smallpt is a C++ global illumination renderer written in less than 100 lines of code. Global illumination is done via unbiased Monte Carlo path tracing and there is multi-threading support via the OpenMP library. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterSmallpt 1.0Global Illumination Renderer; 128 Samplesp32-u16-multicorep32-u18-multicore714212835SE +/- 0.01, N = 3SE +/- 0.10, N = 331.0529.471. (CXX) g++ options: -fopenmp -O3
OpenBenchmarking.orgSeconds, Fewer Is BetterSmallpt 1.0Global Illumination Renderer; 128 Samplesp32-u16-multicorep32-u18-multicore714212835Min: 31.03 / Avg: 31.05 / Max: 31.07Min: 29.31 / Avg: 29.47 / Max: 29.651. (CXX) g++ options: -fopenmp -O3

OpenSSL

OpenSSL is an open-source toolkit that implements SSL (Secure Sockets Layer) and TLS (Transport Layer Security) protocols. This test measures the RSA 4096-bit performance of OpenSSL. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSigns Per Second, More Is BetterOpenSSL 1.1.1RSA 4096-bit Performancep32-u16-multicorep32-u18-multicore2004006008001000SE +/- 7.48, N = 3SE +/- 13.22, N = 3888.90831.131. (CC) gcc options: -pthread -m64 -O3 -lssl -lcrypto -ldl
OpenBenchmarking.orgSigns Per Second, More Is BetterOpenSSL 1.1.1RSA 4096-bit Performancep32-u16-multicorep32-u18-multicore160320480640800Min: 875.6 / Avg: 888.9 / Max: 901.5Min: 808.4 / Avg: 831.13 / Max: 854.21. (CC) gcc options: -pthread -m64 -O3 -lssl -lcrypto -ldl