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2 x Intel Xeon Silver 4114 testing with a Supermicro X11DPL-i v1.10 (2.1 BIOS) and ASPEED ASPEED Family on Ubuntu 18.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1811239-RA-1811230RA04
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Bioinformatics 3 Tests
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April 29 2012
 
sky_c
November 23 2018
  33 Minutes
sky_ub
November 23 2018
  16 Minutes
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phoronixProcessorMotherboardMemoryDiskGraphicsAudioMonitorChipsetNetworkOSKernelDesktopDisplay ServerOpenGLCompilerFile-SystemScreen ResolutionDisplay Drivertestsky_csky_ubAMD Phenom II X4 945 @ 3.00GHz (4 Cores)Gigabyte GA-MA78GM-S2H6144MB160GB Seagate ST3160215ASGallium 0.4 on AMD RS780 512MBRealtek ALC889APLE2607WSCalculate Linux Desktop 11.15 GNOME3.3.3-calculate (x86_64)GNOME Shell 3.2.2.1X Server 1.11.22.1 Mesa 7.11.2 Gallium 0.4GCC 4.5.3 + LLVM 2.9ext41920x12002 x Intel Xeon Silver 4114 @ 2.20GHz (20 Cores / 40 Threads)Supermicro X11DPL-i v1.02 (2.1 BIOS)Intel Sky Lake-E DMI3 Registers8 x 16384 MB DDR4-2400MHz Samsung M393A2K43CB2-CTD1000GB HGST HUS722T1TALASPEED ASPEED FamilyIntel I350 Gigabit ConnectionCentOS Linux 73.10.0-862.14.4.el7.x86_64 (x86_64)GNOME Shell 3.25.4X Server 1.19.5modesetting 1.19.5GCC 4.8.5 20150623xfs1024x768Supermicro X11DPL-i v1.10 (2.1 BIOS)8 x 16384 MB DDR4-2400MT/s Samsung M393A2K43CB2-CTDDELL E197FPUbuntu 18.044.15.0-39-generic (x86_64)GCC 7.3.0ext41280x1024OpenBenchmarking.orgProcessor Details- sky_c: Scaling Governor: acpi-cpufreq conservative- sky_ub: Scaling Governor: acpi-cpufreq ondemandSecurity Details- sky_c: SELinux + KPTI + Load fences __user pointer sanitization + IBRS (kernel) + SSB disabled via prctl and seccomp + PTE Inversion; VMX: SMT vulnerable L1D conditional cache flushes - sky_ub: KPTI + __user pointer sanitization + Full generic retpoline IBPB IBRS_FW + SSB disabled via prctl and seccomp + PTE Inversion; VMX: conditional cache flushes SMT vulnerable Compiler Details- sky_ub: --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++ --enable-libmpx --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib --with-tune=generic --without-cuda-driver -v

testsky_csky_ubResult OverviewPhoronix Test Suite100%464%828%1192%7-Zip CompressionSmallptJohn The RipperNAS Parallel BenchmarksHimeno BenchmarkTimed PHP CompilationC-Ray

phoronixcompress-7zip: Compress Speed Testcompress-pbzip2: 256MB File Compressionx264: H.264 Video Encodingopenssl: RSA 4096-bit Performancegcrypt: CAMELLIA256-ECB Cipherjohn-the-ripper: Blowfishgraphics-magick: Local Adaptive Thresholdinggraphics-magick: Resizinghimeno: Poisson Pressure Solverc-ray: Total Timesmallpt: Global Illumination Renderer; 100 Samplescrafty: Elapsed Timehmmer: Pfam Database Searchmafft: Multiple Sequence Alignmentminion: Quasigroupminion: Solitairenpb: EP.Bnpb: IS.Cnpb: LU.Anpb: UA.Abuild-php: Time To Compiletestsky_csky_ub862317.1463.2656.6532003399439950993.79204113.5925.1113.0723339087.6468.99444618.3854.52752842426120106.03155166114907.88154.0844050156.6418.74699992442121306.63274.171115.32154.6344339169.4118.26OpenBenchmarking.org

7-Zip Compression

OpenBenchmarking.orgMIPS, More Is Better7-Zip Compression 9.20.1Compress Speed Testtestsky_csky_ub16K32K48K64K80KSE +/- 14.98, N = 3SE +/- 588.68, N = 3SE +/- 928.96, N = 3862375284699991. (CXX) g++ options: -pipe -lpthread
OpenBenchmarking.orgMIPS, More Is Better7-Zip Compression 9.20.1Compress Speed Testtestsky_csky_ub13K26K39K52K65KMin: 8594 / Avg: 8623 / Max: 8644Min: 74255 / Avg: 75283.67 / Max: 76294Min: 68150 / Avg: 69999 / Max: 710811. (CXX) g++ options: -pipe -lpthread

Parallel BZIP2 Compression

OpenBenchmarking.orgSeconds, Fewer Is BetterParallel BZIP2 Compression 1.0.5256MB File Compressiontest48121620SE +/- 0.02, N = 317.141. (CXX) g++ options: -O2 -pthread -lpthread -lbz2

x264

OpenBenchmarking.orgFrames Per Second, More Is Betterx264 2011-12-06H.264 Video Encodingtest1428425670SE +/- 0.11, N = 363.26

OpenSSL

OpenBenchmarking.orgSigns Per Second, More Is BetterOpenSSL 1.0.0eRSA 4096-bit Performancetest1326395265SE +/- 0.05, N = 456.651. (CC) gcc options: -m64 -O3 -lssl -lcrypto -ldl

Gcrypt Library

OpenBenchmarking.orgMicroseconds, Fewer Is BetterGcrypt Library 1.4.4CAMELLIA256-ECB Ciphertest7001400210028003500SE +/- 5.77, N = 332001. (CC) gcc options: -O2 -fvisibility=hidden

John The Ripper

OpenBenchmarking.orgReal C/S, More Is BetterJohn The Ripper 1.7.9Test: Blowfishtestsky_csky_ub5K10K15K20K25KSE +/- 2.08, N = 3SE +/- 37.29, N = 3SE +/- 14.36, N = 3339924261244211. (CC) gcc options: -fopenmp -lcrypt
OpenBenchmarking.orgReal C/S, More Is BetterJohn The Ripper 1.7.9Test: Blowfishtestsky_csky_ub4K8K12K16K20KMin: 3396 / Avg: 3399 / Max: 3403Min: 24192 / Avg: 24261 / Max: 24320Min: 24399 / Avg: 24421 / Max: 244481. (CC) gcc options: -fopenmp -lcrypt

GraphicsMagick

OpenBenchmarking.orgIterations Per Minute, More Is BetterGraphicsMagick 1.3.12Operation: Local Adaptive Thresholdingtest1020304050SE +/- 0.00, N = 3431. (CC) gcc options: -std=gnu99 -fopenmp -O2 -pthread -llcms -ltiff -lfreetype -ljasper -ljpeg -lwmflite -lXext -lSM -lICE -lX11 -lbz2 -lxml2 -lz -lm -lrt -lpthread

OpenBenchmarking.orgIterations Per Minute, More Is BetterGraphicsMagick 1.3.12Operation: Resizingtest20406080100SE +/- 0.33, N = 3991. (CC) gcc options: -std=gnu99 -fopenmp -O2 -pthread -llcms -ltiff -lfreetype -ljasper -ljpeg -lwmflite -lXext -lSM -lICE -lX11 -lbz2 -lxml2 -lz -lm -lrt -lpthread

Himeno Benchmark

The Himeno benchmark is a linear solver of pressure Poisson using a point-Jacobi method. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgMFLOPS, More Is BetterHimeno Benchmark 3.0Poisson Pressure Solvertestsky_csky_ub5001000150020002500SE +/- 1.26, N = 3SE +/- 4.43, N = 3SE +/- 5.37, N = 3509201021301. (CC) gcc options: -O3
OpenBenchmarking.orgMFLOPS, More Is BetterHimeno Benchmark 3.0Poisson Pressure Solvertestsky_csky_ub400800120016002000Min: 506.41 / Avg: 508.79 / Max: 510.71Min: 2001.73 / Avg: 2010.11 / Max: 2016.78Min: 2118.86 / Avg: 2129.57 / Max: 2135.531. (CC) gcc options: -O3

C-Ray

This is a test of C-Ray, a simple raytracer designed to test the floating-point CPU performance. This test is multi-threaded (16 threads per core), will shoot 8 rays per pixel for anti-aliasing, and will generate a 1600 x 1200 image. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterC-Ray 1.1Total Timetestsky_csky_ub20406080100SE +/- 0.01, N = 3SE +/- 0.03, N = 3SE +/- 0.01, N = 393.796.036.631. (CC) gcc options: -lm -lpthread -O3
OpenBenchmarking.orgSeconds, Fewer Is BetterC-Ray 1.1Total Timetestsky_csky_ub20406080100Min: 93.77 / Avg: 93.79 / Max: 93.81Min: 5.98 / Avg: 6.03 / Max: 6.09Min: 6.62 / Avg: 6.63 / Max: 6.641. (CC) gcc options: -lm -lpthread -O3

Smallpt

Smallpt is a C++ global illumination renderer written in less than 100 lines of code. Global illumination is done via unbiased Monte Carlo path tracing and there is multi-threading support via the OpenMP library. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterSmallpt 1.0Global Illumination Renderer; 100 Samplestestsky_csky_ub4080120160200SE +/- 0.00, N = 3SE +/- 1.53, N = 3SE +/- 3.49, N = 9204155271. (CXX) g++ options: -fopenmp
OpenBenchmarking.orgSeconds, Fewer Is BetterSmallpt 1.0Global Illumination Renderer; 100 Samplestestsky_csky_ub4080120160200Min: 204 / Avg: 204 / Max: 204Min: 153 / Avg: 155 / Max: 158Min: 21 / Avg: 26.89 / Max: 541. (CXX) g++ options: -fopenmp

Crafty

OpenBenchmarking.orgSeconds, Fewer Is BetterCrafty 23.4Elapsed Timetest306090120150SE +/- 0.23, N = 3113.591. (CC) gcc options: -lstdc++ -lm

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchtest612182430SE +/- 0.15, N = 325.111. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmenttestsky_ub3691215SE +/- 0.00, N = 3SE +/- 0.06, N = 1213.074.171. (CC) gcc options: -O3 -lm -lpthread
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmenttestsky_ub48121620Min: 13.07 / Avg: 13.07 / Max: 13.07Min: 3.75 / Avg: 4.17 / Max: 4.451. (CC) gcc options: -O3 -lm -lpthread

Minion

OpenBenchmarking.orgSeconds, Fewer Is BetterMinion 0.12Benchmark: Quasigrouptestsky_c50100150200250SE +/- 1.68, N = 3SE +/- 2.07, N = 32331661. (CXX) g++ options: -O3 -fomit-frame-pointer -rdynamic -lboost_iostreams-mt -lz -lbz2
OpenBenchmarking.orgSeconds, Fewer Is BetterMinion 0.12Benchmark: Quasigrouptestsky_c4080120160200Min: 230.8 / Avg: 233.02 / Max: 236.32Min: 162.33 / Avg: 166.25 / Max: 169.351. (CXX) g++ options: -O3 -fomit-frame-pointer -rdynamic -lboost_iostreams-mt -lz -lbz2

OpenBenchmarking.orgSeconds, Fewer Is BetterMinion 0.12Benchmark: Solitairetestsky_c80160240320400SE +/- 56.11, N = 6SE +/- 0.49, N = 33901141. (CXX) g++ options: -O3 -fomit-frame-pointer -rdynamic -lboost_iostreams-mt -lz -lbz2
OpenBenchmarking.orgSeconds, Fewer Is BetterMinion 0.12Benchmark: Solitairetestsky_c70140210280350Min: 262.16 / Avg: 389.58 / Max: 516.91Min: 113.54 / Avg: 114.45 / Max: 115.241. (CXX) g++ options: -O3 -fomit-frame-pointer -rdynamic -lboost_iostreams-mt -lz -lbz2

NAS Parallel Benchmarks

OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: EP.Btestsky_csky_ub2004006008001000SE +/- 0.38, N = 3SE +/- 14.93, N = 4SE +/- 1.98, N = 387.64907.881115.321. (F9X) gfortran options: -fopenmp
OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: EP.Btestsky_csky_ub2004006008001000Min: 87.01 / Avg: 87.64 / Max: 88.33Min: 863.31 / Avg: 907.88 / Max: 924.97Min: 1111.38 / Avg: 1115.32 / Max: 1117.641. (F9X) gfortran options: -fopenmp

OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: IS.Ctestsky_csky_ub306090120150SE +/- 0.98, N = 6SE +/- 0.22, N = 3SE +/- 0.79, N = 368.99154.08154.631. (F9X) gfortran options: -fopenmp
OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: IS.Ctestsky_csky_ub306090120150Min: 67.4 / Avg: 68.99 / Max: 72.1Min: 153.79 / Avg: 154.08 / Max: 154.5Min: 153.24 / Avg: 154.63 / Max: 155.981. (F9X) gfortran options: -fopenmp

OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: LU.Atestsky_csky_ub9K18K27K36K45KSE +/- 16.48, N = 3SE +/- 647.30, N = 3SE +/- 123.98, N = 3444644050443391. (F9X) gfortran options: -fopenmp
OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: LU.Atestsky_csky_ub8K16K24K32K40KMin: 4428.86 / Avg: 4446.44 / Max: 4479.38Min: 42755.17 / Avg: 44049.65 / Max: 44711.97Min: 44091.56 / Avg: 44339.46 / Max: 44467.841. (F9X) gfortran options: -fopenmp

OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: UA.Atestsky_csky_ub4080120160200SE +/- 0.12, N = 3SE +/- 0.39, N = 3SE +/- 0.23, N = 318.38156.64169.411. (F9X) gfortran options: -fopenmp
OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: UA.Atestsky_csky_ub306090120150Min: 18.25 / Avg: 18.38 / Max: 18.61Min: 155.99 / Avg: 156.64 / Max: 157.34Min: 168.96 / Avg: 169.41 / Max: 169.661. (F9X) gfortran options: -fopenmp

Timed PHP Compilation

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed PHP Compilation 5.2.9Time To Compiletestsky_csky_ub1224364860SE +/- 0.45, N = 3SE +/- 0.03, N = 3SE +/- 0.07, N = 354.5218.7418.261. (CC) gcc options: -O2 -pedantic -ldl -lz -lm
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed PHP Compilation 5.2.9Time To Compiletestsky_csky_ub1122334455Min: 53.7 / Avg: 54.52 / Max: 55.24Min: 18.69 / Avg: 18.74 / Max: 18.79Min: 18.15 / Avg: 18.26 / Max: 18.391. (CC) gcc options: -O2 -pedantic -ldl -lz -lm