NAMD Benchmark

AMD Ryzen Threadripper 2990WX 32-Core testing with a ASUS ROG ZENITH EXTREME (1402 BIOS) and AMD Radeon RX Vega 8192MB on Ubuntu 16.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1809191-PTS-NAMDBENC69
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Result
Identifier
Performance Per
Dollar
Date
Run
  Test
  Duration
AMD Ryzen Threadripper 2990WX 32-Core
September 19 2018
  3 Minutes

AMD Ryzen Threadripper 2990WX 32-Core

Processor: AMD Ryzen Threadripper 2990WX 32-Core @ 3.00GHz (32 Cores / 64 Threads), Motherboard: ASUS ROG ZENITH EXTREME (1402 BIOS), Chipset: AMD Device 1450, Memory: 32768MB, Disk: Samsung SSD 970 EVO 500GB, Graphics: AMD Radeon RX Vega 8192MB, Audio: Realtek ALC1220, Monitor: ASUS VP28U, Network: Intel I211 Gigabit Connection

OS: Ubuntu 16.04, Kernel: 4.15.0-33-generic (x86_64), Desktop: Unity 7.4.5, Display Server: X Server 1.19.6, Display Driver: amdgpu 18.0.1, OpenGL: 4.5 Mesa 18.0.5 (LLVM 6.0.0), Vulkan: 1.0.61, Compiler: GCC 5.4.0 20160609 + CUDA 9.0, File-System: ext4, Screen Resolution: 3840x2160

Processor Notes: Scaling Governor: acpi-cpufreq ondemand
Security Notes: __user pointer sanitization + Full AMD retpoline IBPB + SSB disabled via prctl and seccomp

NAMD BenchmarkOpenBenchmarking.orgPhoronix Test SuiteAMD Ryzen Threadripper 2990WX 32-Core @ 3.00GHz (32 Cores / 64 Threads)ASUS ROG ZENITH EXTREME (1402 BIOS)AMD Device 145032768MBSamsung SSD 970 EVO 500GBAMD Radeon RX Vega 8192MBRealtek ALC1220ASUS VP28UIntel I211 Gigabit ConnectionUbuntu 16.044.15.0-33-generic (x86_64)Unity 7.4.5X Server 1.19.6amdgpu 18.0.14.5 Mesa 18.0.5 (LLVM 6.0.0)1.0.61GCC 5.4.0 20160609 + CUDA 9.0ext43840x2160ProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay ServerDisplay DriverOpenGLVulkanCompilerFile-SystemScreen ResolutionNAMD Benchmark PerformanceSystem Logs- Scaling Governor: acpi-cpufreq ondemand- __user pointer sanitization + Full AMD retpoline IBPB + SSB disabled via prctl and seccomp

NAMD

NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. NAMD was developed by the Theoretical and Computational Biophysics Group in the Beckman Institute for Advanced Science and Technology at the University of Illinois at Urbana-Champaign. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgdays/ns, Fewer Is BetterNAMD 2.13b1ATPase Simulation - 327,506 AtomsAMD Ryzen Threadripper 2990WX 32-Core0.17070.34140.51210.68280.8535SE +/- 0.00191, N = 30.75879

AMD Ryzen Threadripper 2990WX 32-Core

Processor: AMD Ryzen Threadripper 2990WX 32-Core @ 3.00GHz (32 Cores / 64 Threads), Motherboard: ASUS ROG ZENITH EXTREME (1402 BIOS), Chipset: AMD Device 1450, Memory: 32768MB, Disk: Samsung SSD 970 EVO 500GB, Graphics: AMD Radeon RX Vega 8192MB, Audio: Realtek ALC1220, Monitor: ASUS VP28U, Network: Intel I211 Gigabit Connection

OS: Ubuntu 16.04, Kernel: 4.15.0-33-generic (x86_64), Desktop: Unity 7.4.5, Display Server: X Server 1.19.6, Display Driver: amdgpu 18.0.1, OpenGL: 4.5 Mesa 18.0.5 (LLVM 6.0.0), Vulkan: 1.0.61, Compiler: GCC 5.4.0 20160609 + CUDA 9.0, File-System: ext4, Screen Resolution: 3840x2160

Processor Notes: Scaling Governor: acpi-cpufreq ondemand
Security Notes: __user pointer sanitization + Full AMD retpoline IBPB + SSB disabled via prctl and seccomp

Testing initiated at 19 September 2018 13:38 by user pts.