NatuurpuntGoudbesTestEval-ComputationalAfterICTInstall

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NatuurpuntGoudbesTestEval-ComputationalAfterICTInstall
April 12 2018
 
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NatuurpuntGoudbesTestEval-ComputationalAfterICTInstall

Processor: Intel Xeon E3-1245 v5 @ 3.49GHz (8 Cores), Motherboard: Microsoft Virtual Machine, Memory: 20480MB, Disk: 157GB Virtual Disk

OS: Ubuntu 14.04, Kernel: 4.4.0-116-generic (x86_64), Compiler: GCC 4.8, File-System: ext4, Screen Resolution: 1152x864

Compiler Notes: --build=x86_64-linux-gnu --disable-browser-plugin --disable-libmudflap --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,c++,java,go,d,fortran,objc,obj-c++ --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-arch-directory=amd64 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-4.8-amd64/jre --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-4.8-amd64 --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-4.8-amd64 --with-multilib-list=m32,m64,mx32 --with-tune=generic -v

NatuurpuntGoudbesTestEval-ComputationalAfterICTInstallOpenBenchmarking.orgPhoronix Test SuiteIntel Xeon E3-1245 v5 @ 3.49GHz (8 Cores)Microsoft Virtual Machine20480MB157GB Virtual DiskUbuntu 14.044.4.0-116-generic (x86_64)GCC 4.8ext41152x864ProcessorMotherboardMemoryDiskOSKernelCompilerFile-SystemScreen ResolutionNatuurpuntGoudbesTestEval-ComputationalAfterICTInstall BenchmarksSystem Logs- --build=x86_64-linux-gnu --disable-browser-plugin --disable-libmudflap --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,c++,java,go,d,fortran,objc,obj-c++ --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-arch-directory=amd64 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-4.8-amd64/jre --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-4.8-amd64 --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-4.8-amd64 --with-multilib-list=m32,m64,mx32 --with-tune=generic -v

NatuurpuntGoudbesTestEval-ComputationalAfterICTInstallhmmer: Pfam Database Searchmafft: Multiple Sequence Alignmentmrbayes: Primate Phylogeny Analysisfhourstones: Complex Connect-4 Solvingbyte: Dhrystone 2scimark2: Compositenero2d: Total Timedcraw: RAW To PPM Image Conversionminion: Solitairesudokut: Total TimeNatuurpuntGoudbesTestEval-ComputationalAfterICTInstall8.774.32225.2812135.4732442400.47557.83502.6047.5871.8913.10OpenBenchmarking.org

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database SearchNatuurpuntGoudbesTestEval-ComputationalAfterICTInstall246810SE +/- 0.03, N = 38.771. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

This test performs an alignment of 100 pyruvate decarboxylase sequences. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 7.392Multiple Sequence AlignmentNatuurpuntGoudbesTestEval-ComputationalAfterICTInstall0.9721.9442.9163.8884.86SE +/- 0.09, N = 64.321. (CC) gcc options: -std=c99 -O3 -lm -lpthread

Timed MrBayes Analysis

This test performs a bayesian analysis of a set of primate genome sequences in order to estimate their phylogeny. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MrBayes Analysis 3.1.2Primate Phylogeny AnalysisNatuurpuntGoudbesTestEval-ComputationalAfterICTInstall50100150200250SE +/- 3.20, N = 6225.281. (CC) gcc options: -O3 -msse -mfpmath=sse -march=native -lm -pthread -lmpi -ldl -lhwloc

Fhourstones

This integer benchmark solves positions in the game of Connect-4, as played on a vertical 7x6 board. By default, it uses a 64Mb transposition table with the twobig replacement strategy. Positions are represented as 64-bit bitboards, and the hash function is computed using a single 64-bit modulo operation, giving 64-bit machines a slight edge. The alpha-beta searcher sorts moves dynamically based on the history heuristic. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgKpos / sec, More Is BetterFhourstones 3.1Complex Connect-4 SolvingNatuurpuntGoudbesTestEval-ComputationalAfterICTInstall3K6K9K12K15KSE +/- 12.28, N = 312135.471. (CC) gcc options: -O3

BYTE Unix Benchmark

This is a test of BYTE. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgLPS, More Is BetterBYTE Unix Benchmark 3.6Dhrystone 2NatuurpuntGoudbesTestEval-ComputationalAfterICTInstall7M14M21M28M35MSE +/- 243203.03, N = 332442400.47

SciMark

OpenBenchmarking.orgMflops, More Is BetterSciMark 2.0CompositeNatuurpuntGoudbesTestEval-ComputationalAfterICTInstall120240360480600SE +/- 0.31, N = 3557.831. (CC) gcc options: -lm

Open FMM Nero2D

This is a test of Nero2D, which is a two-dimensional TM/TE solver for Open FMM. Open FMM is a free collection of electromagnetic software for scattering at very large objects. This test profile times how long it takes to solve one of the included 2D examples. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterOpen FMM Nero2D 2.0.2Total TimeNatuurpuntGoudbesTestEval-ComputationalAfterICTInstall110220330440550SE +/- 5.50, N = 3502.601. (CXX) g++ options: -O2 -lfftw3 -llapack -lblas -lgfortran -lquadmath -lm -pthread -lmpi_cxx -lmpi -ldl -lhwloc

dcraw

This test times how long it takes to convert several high-resolution RAW NEF image files to PPM image format using dcraw. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterdcrawRAW To PPM Image ConversionNatuurpuntGoudbesTestEval-ComputationalAfterICTInstall1122334455SE +/- 0.01, N = 347.581. (CC) gcc options: -lm

Minion

Minion is an open-source constraint solver that is designed to be very scalable. This test profile uses Minion's integrated benchmarking problems to solve. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterMinion 1.8SolitaireNatuurpuntGoudbesTestEval-ComputationalAfterICTInstall1632486480SE +/- 0.60, N = 371.891. (CXX) g++ options: -std=gnu++11 -O3 -fomit-frame-pointer -rdynamic

Sudokut

This is a test of Sudokut, which is a Sudoku puzzle solver written in Tcl. This test measures how long it takes to solve 100 Sudoku puzzles. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterSudokut 0.4Total TimeNatuurpuntGoudbesTestEval-ComputationalAfterICTInstall3691215SE +/- 0.01, N = 313.10

NatuurpuntGoudbesTestEval-ComputationalAfterICTInstall

Processor: Intel Xeon E3-1245 v5 @ 3.49GHz (8 Cores), Motherboard: Microsoft Virtual Machine, Memory: 20480MB, Disk: 157GB Virtual Disk

OS: Ubuntu 14.04, Kernel: 4.4.0-116-generic (x86_64), Compiler: GCC 4.8, File-System: ext4, Screen Resolution: 1152x864

Compiler Notes: --build=x86_64-linux-gnu --disable-browser-plugin --disable-libmudflap --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,c++,java,go,d,fortran,objc,obj-c++ --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-arch-directory=amd64 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-4.8-amd64/jre --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-4.8-amd64 --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-4.8-amd64 --with-multilib-list=m32,m64,mx32 --with-tune=generic -v

Testing initiated at 12 April 2018 11:59 by user administrator.