hmm

hmm

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1804028-FO-HMM66356622
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Result
Identifier
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Performance Per
Dollar
Date
Run
  Test
  Duration
hmm
April 02 2018
 


hmmOpenBenchmarking.orgPhoronix Test SuiteIntel Xeon E5-2696 v3 @ 3.80GHz (18 Cores / 36 Threads)ASRock X99 Extreme4/3.1 (P3.40 BIOS)Intel Xeon E7 v3/Xeon129024MB4 x 200GB INTEL SSDSC2BA20 + 240GB Crucial_CT240M50Zotac NVIDIA GeForce GTX 1070 8192MB (1518/4006MHz)Realtek ALC1150EV2411WIntel ConnectionCentOS Linux 73.10.0-693.21.1.el7.x86_64 (x86_64)Cinnamon 3.6.7X Server 1.19.3NVIDIA 390.484.4.0GCC 4.8.5 20150623xfs1920x1200ProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay ServerDisplay DriverOpenGLCompilerFile-SystemScreen ResolutionHmm BenchmarksSystem Logs- Scaling Governor: intel_pstate powersave- SELinux Protection

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchhmm246810SE +/- 0.04, N = 37.131. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm