pts/computational-biology-g645

pts/computational-biology-2618v3

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Bioinformatics 3 Tests
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pts/computational-biology-g645
November 17 2016
 
pts/computational-biology-2618v3
November 17 2016
 
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pts/computational-biology-g645

Processor: Intel Pentium G645 @ 2.90GHz (2 Cores), Motherboard: Gigabyte H61M-S2PV, Chipset: Intel 2nd Generation Core Family DRAM, Memory: 6144MB, Disk: 250GB Hitachi HTS54502 + 120GB KINGSTON SHFS37A, Graphics: Gigabyte NVIDIA GeForce GT 730 2048MB (135/405MHz), Audio: Realtek ALC887-VD, Network: Realtek RTL8111/8168/8411

OS: Arch Linux, Kernel: 4.8.8-1-ARCH (x86_64), Desktop: MATE 1.16.1, Display Server: X Server 1.18.4, Display Driver: NVIDIA 375.10, OpenGL: 4.5.0, Compiler: GCC 6.2.1 20160830, File-System: ext4, Screen Resolution: 1920x1080

Processor Notes: Scaling Governor: intel_pstate powersave

pts/computational-biology-2618v3

Processor: Intel Xeon E5-2618L v3 @ 3.40GHz (16 Cores), Motherboard: ASUS Z10PE-D16, Chipset: Intel Xeon E7 v3/Xeon, Memory: 16384MB, Disk: 275GB Crucial_CT275MX3, Graphics: LLVMpipe, Monitor: ASUS VN248, Network: Intel I350 Gigabit Connection

OS: Fedora 24, Kernel: 4.5.5-300.fc24.x86_64 (x86_64), Desktop: GNOME Shell 3.20.2, OpenGL: 2.1 Mesa 11.2.1 (git-79b0e13) Gallium 0.4, Compiler: GCC 6.2.1 20160916, File-System: ext4, Screen Resolution: 1920x1080

Compiler Notes: --build=x86_64-redhat-linux --disable-libgcj --disable-libunwind-exceptions --enable-__cxa_atexit --enable-bootstrap --enable-checking=release --enable-gnu-indirect-function --enable-gnu-unique-object --enable-initfini-array --enable-languages=c,c++,objc,obj-c++,fortran,ada,go,lto --enable-libmpx --enable-multilib --enable-plugin --enable-shared --enable-threads=posix --mandir=/usr/share/man --with-arch_32=i686 --with-isl --with-linker-hash-style=gnu --with-tune=generic
Processor Notes: Scaling Governor: intel_pstate powersave

pts/computational-biology-g645ProcessorMotherboardChipsetMemoryDiskGraphicsAudioNetworkMonitorOSKernelDesktopDisplay ServerDisplay DriverOpenGLCompilerFile-SystemScreen Resolutionpts/computational-biology-g645pts/computational-biology-2618v3Intel Pentium G645 @ 2.90GHz (2 Cores)Gigabyte H61M-S2PVIntel 2nd Generation Core Family DRAM6144MB250GB Hitachi HTS54502 + 120GB KINGSTON SHFS37AGigabyte NVIDIA GeForce GT 730 2048MB (135/405MHz)Realtek ALC887-VDRealtek RTL8111/8168/8411Arch Linux4.8.8-1-ARCH (x86_64)MATE 1.16.1X Server 1.18.4NVIDIA 375.104.5.0GCC 6.2.1 20160830ext41920x1080Intel Xeon E5-2618L v3 @ 3.40GHz (16 Cores)ASUS Z10PE-D16Intel Xeon E7 v3/Xeon16384MB275GB Crucial_CT275MX3LLVMpipeASUS VN248Intel I350 Gigabit ConnectionFedora 244.5.5-300.fc24.x86_64 (x86_64)GNOME Shell 3.20.22.1 Mesa 11.2.1 (git-79b0e13) Gallium 0.4GCC 6.2.1 20160916OpenBenchmarking.orgProcessor Details- Scaling Governor: intel_pstate powersaveCompiler Details- pts/computational-biology-2618v3: --build=x86_64-redhat-linux --disable-libgcj --disable-libunwind-exceptions --enable-__cxa_atexit --enable-bootstrap --enable-checking=release --enable-gnu-indirect-function --enable-gnu-unique-object --enable-initfini-array --enable-languages=c,c++,objc,obj-c++,fortran,ada,go,lto --enable-libmpx --enable-multilib --enable-plugin --enable-shared --enable-threads=posix --mandir=/usr/share/man --with-arch_32=i686 --with-isl --with-linker-hash-style=gnu --with-tune=generic

Timed HMMer Search

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchpts/computational-biology-g645pts/computational-biology-2618v3816243240SE +/- 0.96, N = 6SE +/- 0.20, N = 335.0017.101. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchpts/computational-biology-g645pts/computational-biology-2618v3714212835Min: 32.28 / Avg: 35 / Max: 39.26Min: 16.7 / Avg: 17.1 / Max: 17.351. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmentpts/computational-biology-g645pts/computational-biology-2618v348121620SE +/- 0.27, N = 6SE +/- 0.18, N = 616.635.711. (CC) gcc options: -O3 -lm -lpthread
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmentpts/computational-biology-g645pts/computational-biology-2618v348121620Min: 15.73 / Avg: 16.63 / Max: 17.44Min: 5.07 / Avg: 5.71 / Max: 6.121. (CC) gcc options: -O3 -lm -lpthread

Timed MrBayes Analysis

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MrBayes Analysis 3.1.2Primate Phylogeny Analysispts/computational-biology-g645816243240SE +/- 2.84, N = 636.54

pts/computational-biology-g645

Processor: Intel Pentium G645 @ 2.90GHz (2 Cores), Motherboard: Gigabyte H61M-S2PV, Chipset: Intel 2nd Generation Core Family DRAM, Memory: 6144MB, Disk: 250GB Hitachi HTS54502 + 120GB KINGSTON SHFS37A, Graphics: Gigabyte NVIDIA GeForce GT 730 2048MB (135/405MHz), Audio: Realtek ALC887-VD, Network: Realtek RTL8111/8168/8411

OS: Arch Linux, Kernel: 4.8.8-1-ARCH (x86_64), Desktop: MATE 1.16.1, Display Server: X Server 1.18.4, Display Driver: NVIDIA 375.10, OpenGL: 4.5.0, Compiler: GCC 6.2.1 20160830, File-System: ext4, Screen Resolution: 1920x1080

Processor Notes: Scaling Governor: intel_pstate powersave

Testing initiated at 17 November 2016 13:43 by user root.

pts/computational-biology-2618v3

Processor: Intel Xeon E5-2618L v3 @ 3.40GHz (16 Cores), Motherboard: ASUS Z10PE-D16, Chipset: Intel Xeon E7 v3/Xeon, Memory: 16384MB, Disk: 275GB Crucial_CT275MX3, Graphics: LLVMpipe, Monitor: ASUS VN248, Network: Intel I350 Gigabit Connection

OS: Fedora 24, Kernel: 4.5.5-300.fc24.x86_64 (x86_64), Desktop: GNOME Shell 3.20.2, OpenGL: 2.1 Mesa 11.2.1 (git-79b0e13) Gallium 0.4, Compiler: GCC 6.2.1 20160916, File-System: ext4, Screen Resolution: 1920x1080

Compiler Notes: --build=x86_64-redhat-linux --disable-libgcj --disable-libunwind-exceptions --enable-__cxa_atexit --enable-bootstrap --enable-checking=release --enable-gnu-indirect-function --enable-gnu-unique-object --enable-initfini-array --enable-languages=c,c++,objc,obj-c++,fortran,ada,go,lto --enable-libmpx --enable-multilib --enable-plugin --enable-shared --enable-threads=posix --mandir=/usr/share/man --with-arch_32=i686 --with-isl --with-linker-hash-style=gnu --with-tune=generic
Processor Notes: Scaling Governor: intel_pstate powersave

Testing initiated at 17 November 2016 20:38 by user vinicio.