computational-biology-intel Running pts/hmmer-1.1.0, pts/mafft-1.4.0 via the Phoronix Test Suite. gcc51-on-intel: Processor: 2 x Intel Xeon E5-2699 v3 @ 3.60GHz (72 Cores), Motherboard: Intel S2600WTT, Chipset: Intel Xeon E5 v3/Core, Memory: 194560MB, Disk: 1000GB Western Digital WD1003FZEX-0, Graphics: Intel HD 5000, Monitor: hp L1730, Network: Intel 10-Gigabit X540-AT2 OS: CentOS 6.6, Kernel: 3.10.72-1.el6.elrepo.x86_64 (x86_64), Display Driver: modesetting 0.8.0, OpenGL: 1.4, Compiler: GCC 5.1.0, File-System: nfs, Screen Resolution: 1440x877 gcc51-on-amd: Processor: 2 x Intel Xeon E5-2699 v3 @ 3.60GHz (72 Cores), Motherboard: Intel S2600WTT, Chipset: Intel Xeon E5 v3/Core, Memory: 194560MB, Disk: 1000GB Western Digital WD1003FZEX-0, Graphics: Intel HD 5000, Monitor: hp L1730, Network: Intel 10-Gigabit X540-AT2 OS: CentOS 6.6, Kernel: 3.10.72-1.el6.elrepo.x86_64 (x86_64), Display Driver: modesetting 0.8.0, OpenGL: 1.4, Compiler: GCC 4.4.7 20120313 + Clang 3.4.2 + LLVM 3.4.2, File-System: nfs, Screen Resolution: 1440x877 Timed HMMer Search 2.3.2 Pfam Database Search Seconds < Lower Is Better gcc51-on-intel . 18.19 |======================================================= gcc51-on-amd ... 11.42 |=================================== Timed MAFFT Alignment 6.864 Multiple Sequence Alignment Seconds < Lower Is Better gcc51-on-intel . 27.20 |======================================================= gcc51-on-amd ... 20.01 |========================================