hmmr

KVM testing on Fedora 21 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1503073-LI-HMMR4616275
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Result
Identifier
View Logs
Performance Per
Dollar
Date
Run
  Test
  Duration
Intel Xeon E312xx
March 07 2015
 


hmmrOpenBenchmarking.orgPhoronix Test Suite2 x Intel Xeon E312xx (Sandy Bridge) @ 3.41GHz (2 Cores)OpenStack Foundation Nova v2014.1.3Intel 440FX- 82441FX PMC1 x 4096 MB RAM QEMU7GBRed Hat QXL paravirtual graphic cardRed Hat Virtio deviceFedora 213.17.4-301.fc21.x86_64 (x86_64)GCC 4.9.2 20150212ext41024x768KVMProcessorMotherboardChipsetMemoryDiskGraphicsNetworkOSKernelCompilerFile-SystemScreen ResolutionSystem LayerHmmr BenchmarksSystem Logs- --build=x86_64-redhat-linux --disable-libgcj --disable-libunwind-exceptions --enable-__cxa_atexit --enable-bootstrap --enable-checking=release --enable-gnu-indirect-function --enable-gnu-unique-object --enable-initfini-array --enable-languages=c,c++,objc,obj-c++,fortran,ada,go,lto --enable-multilib --enable-plugin --enable-shared --enable-threads=posix --mandir=/usr/share/man --with-arch_32=i686 --with-linker-hash-style=gnu --with-tune=generic - SELinux: Enabled.

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database SearchIntel Xeon E312xx612182430SE +/- 0.04, N = 326.181. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm