70HMMER

70hmmer

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1501199-LI-70HMMER6585
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Identifier
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Performance Per
Dollar
Date
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  Test
  Duration
70hmmer
January 19 2015
 


70HMMEROpenBenchmarking.orgPhoronix Test SuiteIntel Pentium E5300 @ 2.59GHz (2 Cores)ASRock G31M-GS.Intel 82G33/G31/P35/P31 + ICH73584MB500GB Seagate ST500DM002-1BD14Intel 82G33/G31 IGPRealtek ALC662 rev1SyncMasterRealtek RTL8111/8168/8411 + Qualcomm Atheros AR9227 WirelessUbuntu 14.043.13.0-36-generic (x86_64)GNOME 3.9.90X Server 1.15.1intel 2.99.9101.4 Mesa 10.1.3GCC 4.8.2ext41440x900ProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay ServerDisplay DriverOpenGLCompilerFile-SystemScreen Resolution70HMMER BenchmarksSystem Logs- --build=x86_64-linux-gnu --disable-browser-plugin --disable-libmudflap --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,c++,java,go,d,fortran,objc,obj-c++ --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-arch-directory=amd64 --with-multilib-list=m32,m64,mx32 --with-tune=generic -v

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Search70hmmer1020304050SE +/- 0.03, N = 344.641. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm