comp_bio_desktop1

Intel Core i7 930 testing with a EVGA 141-BL-E757 and eVGA NVIDIA GeForce GTX 260 896MB on Ubuntu 14.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1501176-SO-COMPBIODE45
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Result
Identifier
Performance Per
Dollar
Date
Run
  Test
  Duration
comp_bio_desktop1
January 17 2015
 
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comp_bio_desktop1OpenBenchmarking.orgPhoronix Test SuiteIntel Core i7 930 @ 2.79GHz (8 Cores)EVGA 141-BL-E757Intel 5520/5500/X58 + ICH10R6144MB1000GB Western Digital WD10EZEX-00K + 1000GB Western Digital WD1001FALS-1 + 120GB KINGSTON SV300S3eVGA NVIDIA GeForce GTX 260 896MB (626/1053MHz)Realtek ALC889Realtek RTL8111/8168/8411Ubuntu 14.043.13.0-44-generic (x86_64)X Server 1.15.13.3.0GCC 4.8ext41920x1080ProcessorMotherboardChipsetMemoryDiskGraphicsAudioNetworkOSKernelDisplay ServerOpenGLCompilerFile-SystemScreen ResolutionComp_bio_desktop1 BenchmarksSystem Logs- --build=x86_64-linux-gnu --disable-browser-plugin --disable-libmudflap --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,c++,java,go,d,fortran,objc,obj-c++ --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-arch-directory=amd64 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-4.8-amd64/jre --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-4.8-amd64 --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-4.8-amd64 --with-multilib-list=m32,m64,mx32 --with-tune=generic -v - Scaling Governor: acpi-cpufreq ondemand

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchcomp_bio_desktop148121620SE +/- 0.08, N = 315.611. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmentcomp_bio_desktop1246810SE +/- 0.01, N = 37.801. (CC) gcc options: -O3 -lm -lpthread

Timed MrBayes Analysis

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MrBayes Analysis 3.1.2Primate Phylogeny Analysiscomp_bio_desktop1510152025SE +/- 0.05, N = 320.55