PONG-computational2

Intel Core i5-3550 testing with a ASUS P8B75-V and MSI NVIDIA GeForce 210 1024MB on Debian 7.3 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1401277-SO-MERGECOMP49
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Bioinformatics 3 Tests
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Nodi Lcm1
January 26 2014
 
Nodi LCM2
January 26 2014
 
ODROID Computational
January 01 2012
 
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PONG-computational2ProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay ServerDisplay DriverCompilerFile-SystemScreen ResolutionOpenGLNodi Lcm1Nodi LCM2ODROID ComputationalIntel Core i5-3550 @ 3.30GHz (4 Cores)ASUS P8B75-VIntel Xeon E3-1200 v2/3rd8192MB1000GB Seagate ST1000DM003-1CH1MSI NVIDIA GeForce 210 1024MBNVIDIA GPU 0b HDMI/DPPhilips 190CRealtek RTL8111/8168BDebian 7.33.2.0-4-amd64 (x86_64)Xfce 4.8X Server 1.12.4NVIDIA 319.37GCC 4.6 + ICC + CUDA 5.0nfs1024x768ARMv7 rev 2 @ 1.40GHz (4 Cores)ODROIDXU2048MB16GB 016G93Debian testing3.4.75 (armv7l)Xfce 4.10X Server 1.14.52.1 Mesa 9.2.2GCC 4.8 + LLVM 3.3ext41280x720OpenBenchmarking.orgCompiler Details- Nodi Lcm1: --build=x86_64-linux-gnu --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-languages=c,c++,fortran,objc,obj-c++ --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-arch-32=i586 --with-tune=generic -v - Nodi LCM2: --build=x86_64-linux-gnu --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-languages=c,c++,fortran,objc,obj-c++ --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-arch-32=i586 --with-tune=generic -v - ODROID Computational: --build=arm-linux-gnueabihf --disable-browser-plugin --disable-libitm --disable-libmudflap --disable-libquadmath --disable-sjlj-exceptions --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,c++,java,go,d,fortran,objc,obj-c++ --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=arm-linux-gnueabihf --target=arm-linux-gnueabihf --with-arch-directory=arm --with-arch=armv7-a --with-float=hard --with-fpu=vfpv3-d16 --with-mode=thumb -v Processor Details- Nodi Lcm1: Scaling Governor: acpi-cpufreq ondemand- ODROID Computational: Scaling Governor: exynos_cpufreq ondemand

Nodi Lcm1Nodi LCM2ODROID ComputationalLogarithmic Result OverviewPhoronix Test Suite 10.2.0CraftySciMarkSudokutdcrawMinionTimed MAFFT AlignmentTimed MrBayes AnalysisOpen FMM Nero2DElapsed TimeCompositeTotal TimeR.T.P.I.CSolitaireM.S.AP.P.ATotal Time

PONG-computational2mafft: Multiple Sequence Alignmentmrbayes: Primate Phylogeny Analysisfhourstones: Complex Connect-4 Solvingbyte: Dhrystone 2scimark2: Compositetscp: AI Chess Performancecrafty: Elapsed Timedcraw: RAW To PPM Image Conversionminion: Solitairenero2d: Total Timesudokut: Total Timehmmer: Pfam Database SearchNodi Lcm1Nodi LCM2ODROID Computational7.0115.6813004.2726381676.401262.41106451176.3862.6480.92442.7521.5811.9839.868261.3316322779.33620.35117.24102.58126.50678.4833.1624.81239.64237.902437070.12291.76353.134572.76104.3386.46OpenBenchmarking.org

Timed MAFFT Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence AlignmentNodi Lcm1Nodi LCM2ODROID Computational612182430SE +/- 0.14, N = 6SE +/- 0.04, N = 3SE +/- 0.64, N = 67.0111.9824.811. (CC) gcc options: -O3 -lm -lpthread
OpenBenchmarking.orgSeconds x GHz, Fewer Is BetterTimed MAFFT Alignment 6.864Performance Per Clock - Multiple Sequence AlignmentNodi Lcm1Nodi LCM2ODROID Computational91827364523.1339.5334.731. Nodi Lcm1: Detected GHz base clock speed (use PTS sensors for real-time frequency/sensor reporting) count of 3.302. Nodi LCM2: Detected GHz base clock speed (use PTS sensors for real-time frequency/sensor reporting) count of 3.303. ODROID Computational: Detected GHz base clock speed (use PTS sensors for real-time frequency/sensor reporting) count of 1.40
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence AlignmentNodi Lcm1Nodi LCM2ODROID Computational612182430Min: 6.57 / Avg: 7.01 / Max: 7.36Min: 11.92 / Avg: 11.98 / Max: 12.05Min: 23.16 / Avg: 24.81 / Max: 26.251. (CC) gcc options: -O3 -lm -lpthread

Timed MrBayes Analysis

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MrBayes Analysis 3.1.2Primate Phylogeny AnalysisNodi Lcm1Nodi LCM2ODROID Computational50100150200250SE +/- 0.02, N = 3SE +/- 0.20, N = 3SE +/- 4.04, N = 315.6839.86239.64
OpenBenchmarking.orgSeconds x GHz, Fewer Is BetterTimed MrBayes Analysis 3.1.2Performance Per Clock - Primate Phylogeny AnalysisNodi Lcm1Nodi LCM2ODROID Computational7014021028035051.74131.54335.501. Nodi Lcm1: Detected GHz base clock speed (use PTS sensors for real-time frequency/sensor reporting) count of 3.302. Nodi LCM2: Detected GHz base clock speed (use PTS sensors for real-time frequency/sensor reporting) count of 3.303. ODROID Computational: Detected GHz base clock speed (use PTS sensors for real-time frequency/sensor reporting) count of 1.40
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MrBayes Analysis 3.1.2Primate Phylogeny AnalysisNodi Lcm1Nodi LCM2ODROID Computational4080120160200Min: 15.66 / Avg: 15.68 / Max: 15.71Min: 39.55 / Avg: 39.86 / Max: 40.23Min: 232.1 / Avg: 239.64 / Max: 245.9

Fhourstones

OpenBenchmarking.orgKpos / sec, More Is BetterFhourstones 3.1Complex Connect-4 SolvingNodi Lcm1Nodi LCM23K6K9K12K15KSE +/- 10.09, N = 3SE +/- 28.57, N = 313004.278261.331. (CC) gcc options: -O3
OpenBenchmarking.orgKpos / sec Per GHz, More Is BetterFhourstones 3.1Performance Per Clock - Complex Connect-4 SolvingNodi Lcm1Nodi LCM280016002400320040003940.692503.431. Detected GHz base clock speed (use PTS sensors for real-time frequency/sensor reporting) count of 3.30
OpenBenchmarking.orgKpos / sec, More Is BetterFhourstones 3.1Complex Connect-4 SolvingNodi Lcm1Nodi LCM22K4K6K8K10KMin: 12984.6 / Avg: 13004.27 / Max: 13018Min: 8204.2 / Avg: 8261.33 / Max: 8290.11. (CC) gcc options: -O3

BYTE Unix Benchmark

OpenBenchmarking.orgLPS, More Is BetterBYTE Unix Benchmark 3.6Dhrystone 2Nodi Lcm1Nodi LCM26M12M18M24M30MSE +/- 3858.49, N = 3SE +/- 12632.38, N = 326381676.4016322779.33
OpenBenchmarking.orgLPS Per GHz, More Is BetterBYTE Unix Benchmark 3.6Performance Per Clock - Dhrystone 2Nodi Lcm1Nodi LCM22M4M6M8M10M7994447.394946296.771. Detected GHz base clock speed (use PTS sensors for real-time frequency/sensor reporting) count of 3.30
OpenBenchmarking.orgLPS, More Is BetterBYTE Unix Benchmark 3.6Dhrystone 2Nodi Lcm1Nodi LCM25M10M15M20M25MMin: 26376702.7 / Avg: 26381676.4 / Max: 26389273.1Min: 16307337.6 / Avg: 16322779.33 / Max: 16347817.7

SciMark

This test runs the ANSI C version of SciMark 2.0, which is a benchmark for scientific and numerical computing developed by programmers at the National Institute of Standards and Technology. This test is made up of Fast Foruier Transform, Jacobi Successive Over-relaxation, Monte Carlo, Sparse Matrix Multiply, and dense LU matrix factorization benchmarks. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgMflops, More Is BetterSciMark 2.0CompositeNodi Lcm1Nodi LCM2ODROID Computational30060090012001500SE +/- 2.37, N = 4SE +/- 1.05, N = 4SE +/- 0.21, N = 41262.41620.35237.90
OpenBenchmarking.orgMflops Per GHz, More Is BetterSciMark 2.0Performance Per Clock - CompositeNodi Lcm1Nodi LCM2ODROID Computational80160240320400382.55187.98169.931. Nodi Lcm1: Detected GHz base clock speed (use PTS sensors for real-time frequency/sensor reporting) count of 3.302. Nodi LCM2: Detected GHz base clock speed (use PTS sensors for real-time frequency/sensor reporting) count of 3.303. ODROID Computational: Detected GHz base clock speed (use PTS sensors for real-time frequency/sensor reporting) count of 1.40
OpenBenchmarking.orgMflops, More Is BetterSciMark 2.0CompositeNodi Lcm1Nodi LCM2ODROID Computational2004006008001000Min: 1255.76 / Avg: 1262.41 / Max: 1266.53Min: 617.21 / Avg: 620.35 / Max: 621.58Min: 237.27 / Avg: 237.9 / Max: 238.21

TSCP

OpenBenchmarking.orgNodes Per Second, More Is BetterTSCP 1.81AI Chess PerformanceNodi Lcm1ODROID Computational200K400K600K800K1000KSE +/- 503.86, N = 5SE +/- 159.92, N = 510645112437071. (CC) gcc options: -O3 -march=native
OpenBenchmarking.orgNodes Per Second, More Is BetterTSCP 1.81AI Chess PerformanceNodi Lcm1ODROID Computational200K400K600K800K1000KMin: 1063277 / Avg: 1064511.2 / Max: 1065334Min: 243276 / Avg: 243707.2 / Max: 2440311. (CC) gcc options: -O3 -march=native

Crafty

OpenBenchmarking.orgSeconds, Fewer Is BetterCrafty 23.4Elapsed TimeNodi Lcm1Nodi LCM2ODROID Computational306090120150SE +/- 0.02, N = 3SE +/- 0.02, N = 3SE +/- 0.01, N = 676.38117.240.121. (CC) gcc options: -lstdc++ -lm
OpenBenchmarking.orgSeconds x GHz, Fewer Is BetterCrafty 23.4Performance Per Clock - Elapsed TimeNodi Lcm1Nodi LCM2ODROID Computational80160240320400252.054386.8920.1681. Nodi Lcm1: Detected GHz base clock speed (use PTS sensors for real-time frequency/sensor reporting) count of 3.302. Nodi LCM2: Detected GHz base clock speed (use PTS sensors for real-time frequency/sensor reporting) count of 3.303. ODROID Computational: Detected GHz base clock speed (use PTS sensors for real-time frequency/sensor reporting) count of 1.40
OpenBenchmarking.orgSeconds, Fewer Is BetterCrafty 23.4Elapsed TimeNodi Lcm1Nodi LCM2ODROID Computational20406080100Min: 76.35 / Avg: 76.38 / Max: 76.41Min: 117.19 / Avg: 117.24 / Max: 117.27Min: 0.11 / Avg: 0.12 / Max: 0.151. (CC) gcc options: -lstdc++ -lm

dcraw

This test times how long it takes to convert several high-resolution RAW NEF image files to PPM image format using dcraw. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterdcrawRAW To PPM Image ConversionNodi Lcm1Nodi LCM2ODROID Computational60120180240300SE +/- 0.26, N = 3SE +/- 0.22, N = 3SE +/- 0.77, N = 362.64102.58291.761. (CC) gcc options: -lm
OpenBenchmarking.orgSeconds x GHz, Fewer Is BetterdcrawPerformance Per Clock - RAW To PPM Image ConversionNodi Lcm1Nodi LCM2ODROID Computational90180270360450206.71338.51408.461. Nodi Lcm1: Detected GHz base clock speed (use PTS sensors for real-time frequency/sensor reporting) count of 3.302. Nodi LCM2: Detected GHz base clock speed (use PTS sensors for real-time frequency/sensor reporting) count of 3.303. ODROID Computational: Detected GHz base clock speed (use PTS sensors for real-time frequency/sensor reporting) count of 1.40
OpenBenchmarking.orgSeconds, Fewer Is BetterdcrawRAW To PPM Image ConversionNodi Lcm1Nodi LCM2ODROID Computational50100150200250Min: 62.23 / Avg: 62.64 / Max: 63.12Min: 102.18 / Avg: 102.58 / Max: 102.93Min: 290.9 / Avg: 291.76 / Max: 293.311. (CC) gcc options: -lm

Minion

OpenBenchmarking.orgSeconds, Fewer Is BetterMinion 0.15SolitaireNodi Lcm1Nodi LCM2ODROID Computational80160240320400SE +/- 0.05, N = 3SE +/- 0.19, N = 3SE +/- 2.39, N = 380.92126.50353.13-lboost_iostreams-mt-lboost_iostreams-mt-lboost_iostreams1. (CXX) g++ options: -O3 -fomit-frame-pointer -rdynamic -lz -lbz2
OpenBenchmarking.orgSeconds x GHz, Fewer Is BetterMinion 0.15Performance Per Clock - SolitaireNodi Lcm1Nodi LCM2ODROID Computational110220330440550267.04417.45494.381. Nodi Lcm1: Detected GHz base clock speed (use PTS sensors for real-time frequency/sensor reporting) count of 3.302. Nodi LCM2: Detected GHz base clock speed (use PTS sensors for real-time frequency/sensor reporting) count of 3.303. ODROID Computational: Detected GHz base clock speed (use PTS sensors for real-time frequency/sensor reporting) count of 1.40
OpenBenchmarking.orgSeconds, Fewer Is BetterMinion 0.15SolitaireNodi Lcm1Nodi LCM2ODROID Computational60120180240300Min: 80.83 / Avg: 80.92 / Max: 81.01Min: 126.19 / Avg: 126.5 / Max: 126.83Min: 349.85 / Avg: 353.13 / Max: 357.791. (CXX) g++ options: -O3 -fomit-frame-pointer -rdynamic -lz -lbz2

Open FMM Nero2D

OpenBenchmarking.orgSeconds, Fewer Is BetterOpen FMM Nero2D 2.0.2Total TimeNodi Lcm1Nodi LCM2ODROID Computational10002000300040005000442.75678.484572.76-lquadmath1. (CXX) g++ options: -O2 -lfftw3 -llapack -lblas -lgfortran -lm
OpenBenchmarking.orgSeconds x GHz, Fewer Is BetterOpen FMM Nero2D 2.0.2Performance Per Clock - Total TimeNodi Lcm1Nodi LCM2ODROID Computational140028004200560070001461.082238.986401.861. Nodi Lcm1: Detected GHz base clock speed (use PTS sensors for real-time frequency/sensor reporting) count of 3.302. Nodi LCM2: Detected GHz base clock speed (use PTS sensors for real-time frequency/sensor reporting) count of 3.303. ODROID Computational: Detected GHz base clock speed (use PTS sensors for real-time frequency/sensor reporting) count of 1.40

Sudokut

This is a test of Sudokut, which is a Sudoku puzzle solver written in Tcl. This test measures how long it takes to solve 100 Sudoku puzzles. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterSudokut 0.4Total TimeNodi Lcm1Nodi LCM2ODROID Computational20406080100SE +/- 0.00, N = 3SE +/- 0.02, N = 3SE +/- 0.26, N = 321.5833.16104.33
OpenBenchmarking.orgSeconds x GHz, Fewer Is BetterSudokut 0.4Performance Per Clock - Total TimeNodi Lcm1Nodi LCM2ODROID Computational30609012015071.21109.43146.061. Nodi Lcm1: Detected GHz base clock speed (use PTS sensors for real-time frequency/sensor reporting) count of 3.302. Nodi LCM2: Detected GHz base clock speed (use PTS sensors for real-time frequency/sensor reporting) count of 3.303. ODROID Computational: Detected GHz base clock speed (use PTS sensors for real-time frequency/sensor reporting) count of 1.40
OpenBenchmarking.orgSeconds, Fewer Is BetterSudokut 0.4Total TimeNodi Lcm1Nodi LCM2ODROID Computational20406080100Min: 21.58 / Avg: 21.58 / Max: 21.59Min: 33.11 / Avg: 33.16 / Max: 33.2Min: 103.86 / Avg: 104.33 / Max: 104.76

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database SearchODROID Computational20406080100SE +/- 1.51, N = 386.461. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm


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