Ubuntu 12.10 x86_64 AMD Opteron Linux

AMD Opteron 2384 testing with a TYAN S2927/S2927-E and AMD Radeon HD 4870 512MB on Ubuntu 12.10 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1311075-SO-UBUNTU12183
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Bioinformatics 3 Tests
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HPC - High Performance Computing 4 Tests
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Multi-Core 5 Tests
Programmer / Developer System Benchmarks 2 Tests
Scientific Computing 4 Tests
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Ubuntu 12.10
November 06 2013
 
Scientific Linux 6.4
November 07 2013
 
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Ubuntu 12.10 x86_64 AMD Opteron LinuxProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorOSKernelDesktopDisplay ServerDisplay DriverOpenGLCompilerFile-SystemScreen ResolutionUbuntu 12.10Scientific Linux 6.4AMD Opteron 2384 @ 2.70GHz (4 Cores)TYAN S2927/S2927-ENVIDIA MCP554096MB64GB AGILITY-EXAMD Radeon HD 4870 512MBATI R6xx HDMIAcer P243WUbuntu 12.103.5.0-17-generic (x86_64)Xfce 4.10X Server 1.13.0radeon 6.99.992.1 Mesa 9.0.3 Gallium 0.4GCC 4.7ext41920x1200AMD ATI RV770 HDMI AudioScientific 6.42.6.32-358.2.1.el6.x86_64 (x86_64)GNOME 2.28.22.1 Mesa 9.0-devel Gallium 0.4GCC 4.4.7 20120313OpenBenchmarking.orgCompiler Details- Ubuntu 12.10: --build=x86_64-linux-gnu --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-languages=c,c++,go,fortran,objc,obj-c++ --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-arch-32=i686 --with-tune=generic -v - Scientific Linux 6.4: --build=x86_64-redhat-linux --disable-dssi --disable-libjava-multilib --disable-libunwind-exceptions --enable-__cxa_atexit --enable-bootstrap --enable-checking=release --enable-gnu-unique-object --enable-java-awt=gtk --enable-java-maintainer-mode --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-libgcj-multifile --enable-shared --enable-threads=posix --mandir=/usr/share/man --with-arch_32=i686 --with-cloog --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --with-ppl --with-tune=generic Disk Details- Ubuntu 12.10: DEADLINE / data=ordered,errors=remount-ro,relatime,rwProcessor Details- Scaling Governor: powernow-k8 ondemandSystem Details- Ubuntu 12.10: Disk Scheduler: DEADLINE.- Scientific Linux 6.4: SELinux: Enabled.Disk Mount Options Details- Scientific Linux 6.4: barrier=1,data=ordered,relatime,rw,seclabel

Ubuntu 12.10 vs. Scientific Linux 6.4 ComparisonPhoronix Test SuiteBaseline+21.1%+21.1%+42.2%+42.2%+63.3%+63.3%+84.4%+84.4%84.4%4.8%D.T.PTotal Time55.6%P.D.S24.8%T.B.T.P.S24.7%M.S.A8.7%P.P.S7.7%Time To CompilePostMarkC-RayTimed HMMer SearchPostgreSQL pgbenchTimed MAFFT AlignmentHimeno BenchmarkTimed Linux Kernel CompilationUbuntu 12.10Scientific Linux 6.4

Ubuntu 12.10 x86_64 AMD Opteron Linuxfs-mark: 1000 Files, 1MB Sizefs-mark: 5000 Files, 1MB Size, 4 Threadsfs-mark: 4000 Files, 32 Sub Dirs, 1MB Sizepostmark: Disk Transaction Performancehpcc: HPLhpcc: PTRANShpcc: MPI FFThpcc: MPIRandomAccesshpcc: Rand Ring Latencyhpcc: Rand Ring Bandwidthhpcc: Max Ping Pong Bandwidthhmmer: Pfam Database Searchmafft: Multiple Sequence Alignmentgraphics-magick: Sharpengraphics-magick: Resizinggraphics-magick: Local Adaptive Thresholdinghimeno: Poisson Pressure Solverbuild-linux-kernel: Time To Compilec-ray: Total Timeffmpeg: H.264 HD To NTSC DVpgbench: TPC-B Transactions Per Secondapache: Static Web Page ServingUbuntu 12.10Scientific Linux 6.422.1738.1321.6514423.933870.633042.271360.034970.00076598.716072168.35022.0211.79438962535.01163.2772.4332.65586.3023763.96265927.4912.81496.64155.83112.72470.19OpenBenchmarking.org

FS-Mark

OpenBenchmarking.orgFiles/s, More Is BetterFS-Mark 3.3Test: 1000 Files, 1MB SizeUbuntu 12.10510152025SE +/- 1.13, N = 622.171. (CC) gcc options: -static

OpenBenchmarking.orgFiles/s, More Is BetterFS-Mark 3.3Test: 5000 Files, 1MB Size, 4 ThreadsUbuntu 12.10918273645SE +/- 2.66, N = 638.131. (CC) gcc options: -static

OpenBenchmarking.orgFiles/s, More Is BetterFS-Mark 3.3Test: 4000 Files, 32 Sub Dirs, 1MB SizeUbuntu 12.10510152025SE +/- 0.49, N = 621.651. (CC) gcc options: -static

PostMark

This is a test of NetApp's PostMark benchmark designed to simulate small-file testing similar to the tasks endured by web and mail servers. This test profile will set PostMark to perform 25,000 transactions with 500 files simultaneously with the file sizes ranging between 5 and 512 kilobytes. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgTPS, More Is BetterPostMark 1.51Disk Transaction PerformanceUbuntu 12.10Scientific Linux 6.46001200180024003000SE +/- 9.94, N = 3SE +/- 16.46, N = 3144226591. (CC) gcc options: -O3
OpenBenchmarking.orgTPS, More Is BetterPostMark 1.51Disk Transaction PerformanceUbuntu 12.10Scientific Linux 6.45001000150020002500Min: 1428 / Avg: 1441.67 / Max: 1461Min: 2631 / Avg: 2659.33 / Max: 26881. (CC) gcc options: -O3

HPC Challenge

OpenBenchmarking.orgGFLOPS, More Is BetterHPC Challenge 1.4.3Test / Class: HPLUbuntu 12.100.88511.77022.65533.54044.4255SE +/- 0.07022, N = 33.933871. (CC) gcc options: -fomit-frame-pointer -O3 -march=native -funroll-loops -lblas -lm -pthread -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil 2. BLAS + Open MPI 1.4.5

OpenBenchmarking.orgGB/s, More Is BetterHPC Challenge 1.4.3Test / Class: PTRANSUbuntu 12.100.14240.28480.42720.56960.712SE +/- 0.00732, N = 30.633041. (CC) gcc options: -fomit-frame-pointer -O3 -march=native -funroll-loops -lblas -lm -pthread -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil 2. BLAS + Open MPI 1.4.5

OpenBenchmarking.orgGFLOP/s, More Is BetterHPC Challenge 1.4.3Test / Class: MPI FFTUbuntu 12.100.51111.02221.53332.04442.5555SE +/- 0.00256, N = 32.271361. (CC) gcc options: -fomit-frame-pointer -O3 -march=native -funroll-loops -lblas -lm -pthread -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil 2. BLAS + Open MPI 1.4.5

OpenBenchmarking.orgGUP/s, More Is BetterHPC Challenge 1.4.3Test / Class: MPIRandomAccessUbuntu 12.100.00790.01580.02370.03160.0395SE +/- 0.00047, N = 30.034971. (CC) gcc options: -fomit-frame-pointer -O3 -march=native -funroll-loops -lblas -lm -pthread -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil 2. BLAS + Open MPI 1.4.5

OpenBenchmarking.orgmsecs, Fewer Is BetterHPC Challenge 1.4.3Test / Class: Random Ring LatencyUbuntu 12.100.00020.00040.00060.00080.001SE +/- 0.00001, N = 30.000761. (CC) gcc options: -fomit-frame-pointer -O3 -march=native -funroll-loops -lblas -lm -pthread -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil 2. BLAS + Open MPI 1.4.5

OpenBenchmarking.orgMB/s, Fewer Is BetterHPC Challenge 1.4.3Test / Class: Random Ring BandwidthUbuntu 12.10130260390520650SE +/- 0.77, N = 3598.721. (CC) gcc options: -fomit-frame-pointer -O3 -march=native -funroll-loops -lblas -lm -pthread -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil 2. BLAS + Open MPI 1.4.5

OpenBenchmarking.orgMB/s, Fewer Is BetterHPC Challenge 1.4.3Test / Class: Max Ping Pong BandwidthUbuntu 12.105001000150020002500SE +/- 2.17, N = 32168.351. (CC) gcc options: -fomit-frame-pointer -O3 -march=native -funroll-loops -lblas -lm -pthread -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil 2. BLAS + Open MPI 1.4.5

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database SearchUbuntu 12.10Scientific Linux 6.4612182430SE +/- 0.06, N = 3SE +/- 0.04, N = 322.0227.491. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database SearchUbuntu 12.10Scientific Linux 6.4612182430Min: 21.93 / Avg: 22.02 / Max: 22.12Min: 27.42 / Avg: 27.49 / Max: 27.561. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence AlignmentUbuntu 12.10Scientific Linux 6.43691215SE +/- 0.01, N = 3SE +/- 0.27, N = 611.7912.811. (CC) gcc options: -O3 -lm -lpthread
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence AlignmentUbuntu 12.10Scientific Linux 6.448121620Min: 11.78 / Avg: 11.79 / Max: 11.82Min: 12.16 / Avg: 12.81 / Max: 13.61. (CC) gcc options: -O3 -lm -lpthread

GraphicsMagick

OpenBenchmarking.orgIterations Per Minute, More Is BetterGraphicsMagick 1.3.16Operation: SharpenUbuntu 12.101020304050SE +/- 0.00, N = 3431. (CC) gcc options: -std=gnu99 -fopenmp -O2 -pthread -lXext -lSM -lICE -lX11 -lz -lm -lgomp -lpthread

OpenBenchmarking.orgIterations Per Minute, More Is BetterGraphicsMagick 1.3.16Operation: ResizingUbuntu 12.1020406080100SE +/- 0.33, N = 3891. (CC) gcc options: -std=gnu99 -fopenmp -O2 -pthread -lXext -lSM -lICE -lX11 -lz -lm -lgomp -lpthread

OpenBenchmarking.orgIterations Per Minute, More Is BetterGraphicsMagick 1.3.16Operation: Local Adaptive ThresholdingUbuntu 12.101428425670SE +/- 0.00, N = 3621. (CC) gcc options: -std=gnu99 -fopenmp -O2 -pthread -lXext -lSM -lICE -lX11 -lz -lm -lgomp -lpthread

Himeno Benchmark

The Himeno benchmark is a linear solver of pressure Poisson using a point-Jacobi method. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgMFLOPS, More Is BetterHimeno Benchmark 3.0Poisson Pressure SolverUbuntu 12.10Scientific Linux 6.4120240360480600SE +/- 1.01, N = 3SE +/- 1.61, N = 3535.01496.641. (CC) gcc options: -O3
OpenBenchmarking.orgMFLOPS, More Is BetterHimeno Benchmark 3.0Poisson Pressure SolverUbuntu 12.10Scientific Linux 6.490180270360450Min: 533.94 / Avg: 535.01 / Max: 537.04Min: 494.29 / Avg: 496.64 / Max: 499.711. (CC) gcc options: -O3

Timed Linux Kernel Compilation

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed Linux Kernel Compilation 3.1Time To CompileUbuntu 12.10Scientific Linux 6.44080120160200SE +/- 1.00, N = 3SE +/- 1.14, N = 3163.27155.83
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed Linux Kernel Compilation 3.1Time To CompileUbuntu 12.10Scientific Linux 6.4306090120150Min: 162.22 / Avg: 163.27 / Max: 165.26Min: 154.69 / Avg: 155.83 / Max: 158.1

C-Ray

This is a test of C-Ray, a simple raytracer designed to test the floating-point CPU performance. This test is multi-threaded (16 threads per core), will shoot 8 rays per pixel for anti-aliasing, and will generate a 1600 x 1200 image. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterC-Ray 1.1Total TimeUbuntu 12.10Scientific Linux 6.4306090120150SE +/- 0.04, N = 3SE +/- 0.05, N = 372.43112.721. (CC) gcc options: -lm -lpthread -O3
OpenBenchmarking.orgSeconds, Fewer Is BetterC-Ray 1.1Total TimeUbuntu 12.10Scientific Linux 6.420406080100Min: 72.39 / Avg: 72.43 / Max: 72.5Min: 112.61 / Avg: 112.72 / Max: 112.791. (CC) gcc options: -lm -lpthread -O3

FFmpeg

OpenBenchmarking.orgSeconds, Fewer Is BetterFFmpeg 2.0H.264 HD To NTSC DVUbuntu 12.10816243240SE +/- 0.04, N = 332.651. (CC) gcc options: -lavdevice -lavfilter -lavformat -lavcodec -lswresample -lswscale -lavutil -ldl -lXv -lX11 -lXext -lasound -lSDL -lm -pthread -lrt -std=c99 -fomit-frame-pointer -O3 -fno-math-errno -fno-signed-zeros -fno-tree-vectorize -MMD -MF -MT

PostgreSQL pgbench

OpenBenchmarking.orgTPS, More Is BetterPostgreSQL pgbench 8.4.11TPC-B Transactions Per SecondUbuntu 12.10Scientific Linux 6.4130260390520650SE +/- 3.71, N = 3SE +/- 5.08, N = 3586.30470.191. (CC) gcc options: -O2 -fno-strict-aliasing -fwrapv -lpgport -lpq -lcrypt -ldl -lm
OpenBenchmarking.orgTPS, More Is BetterPostgreSQL pgbench 8.4.11TPC-B Transactions Per SecondUbuntu 12.10Scientific Linux 6.4100200300400500Min: 582.55 / Avg: 586.3 / Max: 593.72Min: 461.26 / Avg: 470.19 / Max: 478.851. (CC) gcc options: -O2 -fno-strict-aliasing -fwrapv -lpgport -lpq -lcrypt -ldl -lm

Apache Benchmark

OpenBenchmarking.orgRequests Per Second, More Is BetterApache Benchmark 2.4.3Static Web Page ServingUbuntu 12.105K10K15K20K25KSE +/- 125.77, N = 323763.961. (CC) gcc options: -shared -fPIC -O2 -pthread